| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0903 |
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| Symbol | |
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| ID | 5454730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 974469 |
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| End bp | 975644 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876474 |
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| Product | HK97 family phage portal protein |
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| Protein accession | YP_001412183 |
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| Protein GI | 154251359 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.580107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATC CGTTGACGTC GCTGGCGCGG CTGGTGCGGC CGCGTGAGGC GAAGCACTCG
CGCGTGGCGC CGGTGATTGC GTTGCATATG CAGGGGAGGG CCGTGTGGAC GCCGCGGGAT
TATGCGCCGC TGGCGGAGGA GGGCTATCAG CGGAACGCAA TTGCCTATCG CTGCGTGCGG
ATGATTGCCG AGGCGGCGGC GAGTGTGCCC TGGCTGCTTT ATGACGGGGC GCGGGAGCTG
AGCGAGCATC CGCTGCTGCG GCTGATCGAA AGCCCGAACA GGGGGCAGGC GGGGGCGGAG
CTTTTCGAGA CCTGGTACAG CTACCTGCAG GTGGCGGGGA ATGCCTATCT CGAACTTGTG
GAGGTGGACG GGGCCCCGCG CGAGCTTTAT GCGCTGAGGC CAGACCGCAT GAAGGCGGTG
CCGGGGCGGG CGGGCTGGCC GGAGGCTTAC GAATATTCCG TGAACGGACG GAGCGTGACT
ATTCCCTGCG GCGAGCGGAG CCCGGTGCTG CATATGCGGC TCTTCCACCC TTCCGACGAT
CATTATGGCT TGAGCCCGCT GGAAGCGGCG GCCTATGCCA TCGACATTCA CAATGCGGCC
GGCGCCTGGA ACAAGGCGCT GCTCGACAAT GCGGCGCGGC CTTCCGGCGC GCTGGTCTAC
AAGGGCGGCG AGGCGGGCGC GAACCTCACC GAAGATCAGT TCGAGCGGCT GAAGCGGGAG
CTGGCGGAAA ATTATCAGGG CGCGGCCAAT GCCGGGCGGC CGCTGCTGCT GGAAGGCGGA
CTCGACTGGC AGAGCATGGG GCTTTCGCCG AAGGATATGG ACTTCATCGA GGCGAAGCGG
ACGGCGGCGC GGGAAATCGC GCTCGCTTTC GGCGTGCCGC CGATGCTGCT CGGCATTCCG
GGCGACAATA CCTATTCCAA TTACCGCGAG GCGAACCGGG CCTTCTGGCG CGGCACCGTG
CTGCCGCTGG TCGGCCGCTC GGCACGCGCG CTGACGCATT GGCTGGCACC CCGCTATGAG
GGGAAGCTCA GGCTCTGGTA TGACGCCGAC CAGGTGGAGG CGCTGGCCGC CGACCGCGAC
GCGCTGTGGG CGCGGGTGGG CGCGGCCGAT TTCCTCAGCG ACGAGGAAAA GCGCGAGGCA
GTGGGCTATG GCAAGGTCAA AGCGTCTTCG ACTTGA
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| Protein sequence | MPNPLTSLAR LVRPREAKHS RVAPVIALHM QGRAVWTPRD YAPLAEEGYQ RNAIAYRCVR
MIAEAAASVP WLLYDGAREL SEHPLLRLIE SPNRGQAGAE LFETWYSYLQ VAGNAYLELV
EVDGAPRELY ALRPDRMKAV PGRAGWPEAY EYSVNGRSVT IPCGERSPVL HMRLFHPSDD
HYGLSPLEAA AYAIDIHNAA GAWNKALLDN AARPSGALVY KGGEAGANLT EDQFERLKRE
LAENYQGAAN AGRPLLLEGG LDWQSMGLSP KDMDFIEAKR TAAREIALAF GVPPMLLGIP
GDNTYSNYRE ANRAFWRGTV LPLVGRSARA LTHWLAPRYE GKLRLWYDAD QVEALAADRD
ALWARVGAAD FLSDEEKREA VGYGKVKASS T
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