Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0889 |
Symbol | |
ID | 5453887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 957799 |
End bp | 959457 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640876460 |
Product | sulfite reductase (ferredoxin) |
Protein accession | YP_001412169 |
Protein GI | 154251345 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0812727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGTT ACGATGAATT CGACCAGCAG CTTGTGAACG AGCGCGTCGC GCAGTTCAGC GGCCAGGTGG CGCGCCGCCT GTCCGGCGAA CTCACTGAAG ACGAGTTCAA GCAGCTCCGG CTGATGAACG GCGTCTATCT CCAGCTTCAT GCCTACATGC TGCGGATCGC GGTGCCTTAC GGCACGCTGT CGTCGAAGCA GCTTCGCATG CTCGCGCATA TCGGCCGCAA ATATGACCGC GGCTACGGTC ACTTTACGAC ACGCCAGAAC CTTCAGTTCA ACTGGCCGGC GTTGAAAGAC GTGCCGGACA TCCTGCGCGA TCTTGCCTCC GTCGAGATGC ACTGCATTCA GACCTCGGGC AATTGCATCC GCAACGTGAC GTCGGACCAG TATGCGGGCG CGGCCAAGGA AGAGCTGGAA GATCCCCGCA TCGTTTCGGA AATCATCCGT CAGTGGTCGA CCTTCCATCC GGAATTCTCG TTCCTCCCGC GCAAGTTCAA GATCGCCGTT TCCGGCACGC CGGACGACCG CGCCGCAATC CGCGTCCATG ACATCGGCAT CCAGATCGTC AAGAACGGCA AGGATGAGAT CGGGTACGAG ATTTTCGTCG GTGGCGGTCT CGGCCGCACG CCGATGGTGG GCAAGAAGAT CGCGGATTTC GTTCCGAAGG AAGACCTGCT CGCCTATCTC GAAGCGATCC TGCGCGTCTA CAACATGTAT GGCCGCCGCG ACAATATCTA CAAGGCGCGC ATCAAGATCC TCGTGCATGA GATTGGCGCG GACGAAATGA AGCGGCAGGT CGATGCCGAG TTTGCCGAAA TCCGCAAGGC CGGCGCCCTT CATCTGCCGC AGGAAGAAGT TGCGCGGATC GAAGCCTATT TCCGCGCGCC GGATTTCGAG ACGCTGCCGG ATGAAAGCAC CGAACTCAAC AAGGCTGTCG TTGCCGATCC TGCCTTCGCC AACTGGGTAA AGTCGAACGT CGCGGCGCAC AGAGTGCCGG GCTATGCCAT CGTCAACATC TCGCTGAAGC CCATCGGCGG CACGCCGGGC GATTGCTCGT CGGATCAGAT GGATGCAGTC GCGGACATTG CGGAGAAGTA CAGCTTCGAT GAATTGCGCG TCACGCATGA GCAGAACCTG ACGCTCGCGC ATGTCCGCAA GAAGGATCTC CACGCGGTCT ACCAGGCGCT GAAGCCACAT GATCTGGCGA CGGCGAACAT CAATCTCATC ACCGACCAGA TTGCCTGCCC CGGTCTCGAT TATTGCGCGC TGGCCAATGC ACGCTCCATC CCGATCGCTC AGCGCATCTC CGAACGTTTT GCCGACATCG AGCGGCAGCA CGATATCGGC GAGCTGAAGA TCAACACGTC GGGCTGCATC AATGCCTGCG GCCATCACCA TGTCGGCCAT ATCGGCATTC TCGGCGTCGA CAAGAAGGGC GTCGAATATT ACCAGGTGAC GCTGGGCGGC GCGGCGGATG AGAAGACCGC CGTCGGCGAC ATCGTCGGCC CTGCCTTTAC CGAAGAGCAG ATCGTCGATG CCATCGAGAC GATCGTCACC ACCTATCTCG GCACGCGCCA GCCGGGCGAA CGGTTCATCG ACACCTATCG CCGCGTCGGC ATCGACCCGT TCAAGGAGAG CCTCTATGCA ACTCATTAG
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Protein sequence | MYRYDEFDQQ LVNERVAQFS GQVARRLSGE LTEDEFKQLR LMNGVYLQLH AYMLRIAVPY GTLSSKQLRM LAHIGRKYDR GYGHFTTRQN LQFNWPALKD VPDILRDLAS VEMHCIQTSG NCIRNVTSDQ YAGAAKEELE DPRIVSEIIR QWSTFHPEFS FLPRKFKIAV SGTPDDRAAI RVHDIGIQIV KNGKDEIGYE IFVGGGLGRT PMVGKKIADF VPKEDLLAYL EAILRVYNMY GRRDNIYKAR IKILVHEIGA DEMKRQVDAE FAEIRKAGAL HLPQEEVARI EAYFRAPDFE TLPDESTELN KAVVADPAFA NWVKSNVAAH RVPGYAIVNI SLKPIGGTPG DCSSDQMDAV ADIAEKYSFD ELRVTHEQNL TLAHVRKKDL HAVYQALKPH DLATANINLI TDQIACPGLD YCALANARSI PIAQRISERF ADIERQHDIG ELKINTSGCI NACGHHHVGH IGILGVDKKG VEYYQVTLGG AADEKTAVGD IVGPAFTEEQ IVDAIETIVT TYLGTRQPGE RFIDTYRRVG IDPFKESLYA TH
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