| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0883 |
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| Symbol | |
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| ID | 5454731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 952202 |
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| End bp | 953344 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876454 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001412163 |
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| Protein GI | 154251339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.199191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGCG TGATTGAAAA TTTCGAGGAA TACTGGCTCC TGATACGCGA CGTCTGGGAT
ACCGGCTTTC TCGGGCACAG CATCGGCAAT CTTCTCGTCG CGGTTTTCAT TTTCGGCATC
TTTTTCGTGC TGCGCGGTAT CTTCACGCGC TTCGTTCTCT CGATCATGGA TCGTTGGGTG
GAGCGGACGG AGACGAAGCT CGACGACTAT CTGCGCGATG CCGTGAGGAG CCCCTTGCGC
TTCCTCTTCT TCGCGCTCGG GTTCTTTTTC GCCACGCAAT ATCTCGATTT CGAAGGCGAC
ATGGAACGCT TCGCGGAAAA CGCCAACCGC ACCCTCATCA TCATTGCGAT CTTCTGGGCA
ATCTATAATG CCGTGCAGCC GGTGAGCATG GCGCTCGACA GGCTGAAGAC GCTGCTGACG
CCGGAGATTC TCCAATGGCT GATCGCGGGC GCAAAGACGG CCATCGTTCT CATCGCCGGT
GCGACGATAC TCCAGACATG GGGCATCCAG GTCGCGCCGA TCATCGCCGG CCTCGGGCTT
TTCGGCGTGG CGGTGGCGCT CGGCGCGCAG GACCTCTTCA AGAACCTGAT CGGCGGCATG
TCCATTCTGA TCGAGCGGCG CTTCGGCATC GGCGACTGGA TCAAGGTGGA GGGTGTCGTC
GAAGGCACTG TCGAGAAGAT CGGCTTCCGC TCGACACATG TCCGCCGCTT CGACAAGGCG
CCGGTCTATG TGCCGAACCA GCATTTGTCG GATAATGCGG TGACGAATTT CTCGGCCATG
ACCTATCGCC GGATTTCATG GCTGATCGGC GTCGAGTATC GCACCACGCA TGAGCAGCTT
CGTCAGATCC GCGACGACAT CGAAGCCTAT CTGCGCGCGG CGGAGGATTT CGCGCAGCCG
CCTTCCGCGC CGCTCTTCGT ACGTATCGAC AGTTTCGGTC CTTCCTCGAT CGACATTCTT
GTTTACTGCT TCACGAAGAC GACGGTTTGG GGCGAGTGGC TGGAAGTGAA GGAGGCGCTG
GCGCACCGCA TCAAGCAGAT CGTCGAGGGC GCCGGCGCAG GCTTCGCCTT GCCGAGCCAG
TCGATCTATG TCGAGACGCT GCCGCTTGCG CCGGACGAGA TCGCGGCCGA GAAGAAGACG
TAG
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| Protein sequence | MEGVIENFEE YWLLIRDVWD TGFLGHSIGN LLVAVFIFGI FFVLRGIFTR FVLSIMDRWV
ERTETKLDDY LRDAVRSPLR FLFFALGFFF ATQYLDFEGD MERFAENANR TLIIIAIFWA
IYNAVQPVSM ALDRLKTLLT PEILQWLIAG AKTAIVLIAG ATILQTWGIQ VAPIIAGLGL
FGVAVALGAQ DLFKNLIGGM SILIERRFGI GDWIKVEGVV EGTVEKIGFR STHVRRFDKA
PVYVPNQHLS DNAVTNFSAM TYRRISWLIG VEYRTTHEQL RQIRDDIEAY LRAAEDFAQP
PSAPLFVRID SFGPSSIDIL VYCFTKTTVW GEWLEVKEAL AHRIKQIVEG AGAGFALPSQ
SIYVETLPLA PDEIAAEKKT
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