Gene Plav_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0871 
Symbol 
ID5454005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp943766 
End bp944182 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content61% 
IMG OID640876442 
ProductMucR family transcriptional regulator 
Protein accessionYP_001412151 
Protein GI154251327 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAAA AGGCGGAATT GATCGACATG ACGGCCGAAA TCGTTTCGGC CTATGTGGGC 
CATAACACCC TTTCTCCTGA CGAAATTCCC GGTCTCATCA ACAAGGTTTT CGCCGCCCTC
GCAGGCGCGA ACGGAATTGC GCCGGCGCCG GCCGAGAAGC TCGAGCCCGC GGTGTCCATC
CGCAAATCCG TGACGCCGGA TCATCTGATC TGTCTTGAAG ACGGCAAGAA GTTCAAGTCG
CTGAAGCGCC ACCTGCGCAC GCATTACAAT CTGACCCCGG AACAATATCG CGAGAAGTGG
GGACTACCCC GCGACTATCC GATGGTGGCA CCGAATTATG CACAGGCGCG CTCGCGCCTC
GCGAAGAAGA TGGGTCTCGG CCAGGGCGCC GGCGGCCGCC GCCGCACCGC AAAATAA
 
Protein sequence
MAEKAELIDM TAEIVSAYVG HNTLSPDEIP GLINKVFAAL AGANGIAPAP AEKLEPAVSI 
RKSVTPDHLI CLEDGKKFKS LKRHLRTHYN LTPEQYREKW GLPRDYPMVA PNYAQARSRL
AKKMGLGQGA GGRRRTAK