Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0852 |
Symbol | |
ID | 5455998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 926270 |
End bp | 927067 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640876423 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_001412132 |
Protein GI | 154251308 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAA CAATGGAAAA GCTCCCCCGC GCGCGCAGCG TTGCGGAGGC AAAGCAGCAA CTCACCGAAC ACGGCCTCAC GATCATGGAA GACGTGCTCG ACGCAGAAGG CATCGCAAGG GTCCGCGCGG CACTCAAGCG GGGCATCGAA GCGGACAATG CAAACGGCGT TCAGCTTCAC GGATTTTCCT TCGATCCCGA CACACTCAAC ACGCGCGTTT TCAATCTCAT CGGCAAGGAT CAGGTCTTCC GCGATCTCGT GCAGCATCCC GCTGCCGTCG AGCTGGTCCG CTATCTTCTC GACGGTCCTT TTCTCCTGTC GAATTTCTCC GCGAATGTCA CGGCGCCCGG TTCCGGGGCG ATGGGGATGC ATGCCGATCA AGGTTATGTG CCGGCACCCT GGCCATCCTA TCCGCTGGCG ATCAACGTTG CGTGGGCACT CGATGACTTT ACGGTTGAAA ACGGCGCGAC ACGCTTCGTG CCCGGTTCTC ATCTGAAAGA TCACGGCCCC GGCAAAGCCA GCGAACGCGC GCAAACAGTG CCCATCATCT GCAAGGCCGG CTCCATCTTC GTGATGGACG GTCGCGTCTG GCACCAGACT GGACCGAACA CAAGCGGTGG AGACACGCGC GCCGGGCTCT TCGCCTATTA CGTCCGTCCT TTTATCAGGC CGCAATGGAA CTGGTATCTG ACGCTGGCGC CGGAAGTCGT GCGCGGCGCC AGCCCGCTCT TGCGCGAAAT GCTCGGCTAT GAACGGAACC CGACGGGCGA TCTGCAAACG GTGCATTCCG GCACTTGA
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Protein sequence | MTTTMEKLPR ARSVAEAKQQ LTEHGLTIME DVLDAEGIAR VRAALKRGIE ADNANGVQLH GFSFDPDTLN TRVFNLIGKD QVFRDLVQHP AAVELVRYLL DGPFLLSNFS ANVTAPGSGA MGMHADQGYV PAPWPSYPLA INVAWALDDF TVENGATRFV PGSHLKDHGP GKASERAQTV PIICKAGSIF VMDGRVWHQT GPNTSGGDTR AGLFAYYVRP FIRPQWNWYL TLAPEVVRGA SPLLREMLGY ERNPTGDLQT VHSGT
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