Gene Plav_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0830 
Symbol 
ID5454112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp902229 
End bp903134 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content62% 
IMG OID640876401 
Producthypothetical protein 
Protein accessionYP_001412110 
Protein GI154251286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.53899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.456006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCT GGATTCCGCT GACAATCGCA GCTGCGTTCC TGCAGAACCT GCGCTCGACG 
TTGCAGAAGC AACTGACGGG TGAGATGTCG GCGCTCGGTG CTACCTATGT GCGCTTCGCC
TATGGGTTGC CGGTGGCGGC ACTTTACCTG TGGGGGCTTC TCGCCTTTAC GGGCGCCGCG
ATGCCGGAGG CGAATGCGTC TTTTCTGGCT TATGCGACGG TGGGCGGGCT GGCGCAGATA
TGGGGGACGG TGCTGCTGGT GGCGCTGTTC GCCTATCGCA ATTTCGCGGT GGGCACGACC
TATTCCAAGA CGGAGACGAT CCAGACCGCT CTCTTCGGCA TCATCGTGCT GGGCGACCAT
CTGAGCTTCG GGGCCTTTGC CGCCATCCTT ATCAGCCTTG CCGGCGTTCT CGCGATTTCG
ATCGCGCAGT CGAAGCTGAC GTTGGGCACA TTCTGGCGGT CGCTCGGCGA GAAACCGACG
CTGATGGGGA TCGGCTCTGG CGCCTGCTAC GGCGTGGCGG CGGTATGCTA CCGGGCGGCA
TCGCTATCGC TGGAGCGGCC GGATTTTCTG GTTTCCGCCG CCTATACGCT CGTGATCGTG
CTGCTCATAC AAACGGCGGT CATGACGGTA TGGCTGCGCC TGCGGCATCC GGCGGAGCTT
TCCGCGTCGT TCCGGACGTG GAAAGTGAGC TCGCTTGTCG GTGTGACCGG CGCGCTGGCC
TCCATGGGTT GGTTCACGGC AATGACGATA CAGAACGCGG CTTATGTGCG GGCGCTCGGG
CAGATCGAGC TCGTCTTCAC TTTCGCTTCG TCGCATTTCC TGTTCCGGGA AAAGACGAAC
GCGCTGGAGC TTACCGGCAT TGCGCTGGTC ATTGGCGGCA TTCTGCTGCT GATATTCGCC
CGCTAG
 
Protein sequence
MPLWIPLTIA AAFLQNLRST LQKQLTGEMS ALGATYVRFA YGLPVAALYL WGLLAFTGAA 
MPEANASFLA YATVGGLAQI WGTVLLVALF AYRNFAVGTT YSKTETIQTA LFGIIVLGDH
LSFGAFAAIL ISLAGVLAIS IAQSKLTLGT FWRSLGEKPT LMGIGSGACY GVAAVCYRAA
SLSLERPDFL VSAAYTLVIV LLIQTAVMTV WLRLRHPAEL SASFRTWKVS SLVGVTGALA
SMGWFTAMTI QNAAYVRALG QIELVFTFAS SHFLFREKTN ALELTGIALV IGGILLLIFA
R