| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0829 |
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| Symbol | |
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| ID | 5455586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 900941 |
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| End bp | 901810 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876400 |
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| Product | taurine dioxygenase |
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| Protein accession | YP_001412109 |
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| Protein GI | 154251285 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.161297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.464747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAG CCGCCGCGAA ACCGCGCAGC ATCCATGTGA AGCCGAACGC ATCCGGCTTT
GGTGCCGAAA TCACCGGCCT CGATCTGTCG AAGCCGCTCC CGCCCGATGT GCTGGCGGAA
GTGCATCGGG CATGGGCAGA CCACGCCGTC GTCTGGTTCC CCGATCAGCC GCTCACGCAT
GACGAGCTTG AAGCCTTCAC CCTCCAGATC GGCCCCTTTG GCCACGATCC CTTCATCGCA
CCCATGGAAG GCCGCCCGCA TATTCTCGAA CTGCGCCGCG AGCCGAACGA GAAGGCGCGG
AATTTCGGCG CCGGCTGGCA TTCGGACTGG AGCTTCCAGG AAGAGCCGCC CGCCGCCACC
ATCCTGCACT CAAAGGTAAC GCCCCCCGTC GGCGGCGACA CGCTCTATGC CGATTGCACC
CGCGCTTATG ACGCGCTTTC GGATGAGATG AAGAAAGTGC TTTCCGGCCT CACCGCTGTT
CACAGCGCCG CGCTTCCCTA CGGCACCAAG GGCATCTTCG CGCAGGAAAA AGAGCAGCGG
ACAATGAAAA TCATCGTCAG CAAGGAAGCC GAGAAAACAT GTCCGCATCC GCTGGTGCGT
ACGCATCCTG TCACCGGCCG TAAGGCGCTC TATGTCAGTC CCGTTTACAC CGTCGGCATC
GAAAGCATGA CGCATGAGGA ATCCGCCGCC ATTCTCGGTT TCCTTTACAC CCACATGACG
AAAGATGAAT TCGTCTACCG CCACAAATGG CGCGAGAACA TGCTCACCAT GTGGGACAAC
CGCTGCACGC TGCATTTTGC CGATGGCGGC TATGACGGTC ATCTGCGTGT CATGCACCGG
ACCACCGTCG CAGGTGATGT ACCGCATTAA
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| Protein sequence | MSQAAAKPRS IHVKPNASGF GAEITGLDLS KPLPPDVLAE VHRAWADHAV VWFPDQPLTH
DELEAFTLQI GPFGHDPFIA PMEGRPHILE LRREPNEKAR NFGAGWHSDW SFQEEPPAAT
ILHSKVTPPV GGDTLYADCT RAYDALSDEM KKVLSGLTAV HSAALPYGTK GIFAQEKEQR
TMKIIVSKEA EKTCPHPLVR THPVTGRKAL YVSPVYTVGI ESMTHEESAA ILGFLYTHMT
KDEFVYRHKW RENMLTMWDN RCTLHFADGG YDGHLRVMHR TTVAGDVPH
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