Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0828 |
Symbol | |
ID | 5455401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 900042 |
End bp | 900872 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640876399 |
Product | taurine dioxygenase |
Protein accession | YP_001412108 |
Protein GI | 154251284 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.297497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.696924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGCGA TCGAAGTTCG GAAAATGACG GGCGGCTGTG GCGCCGAAGT GCTCGGCGCC GATCTGGCGA AGCTGAGCAA TTCGGACATG GAGGCCGTGC GGCAGGCCTA TGTCGACTAC GGCGTCGTCT TCTTCCGCGA CCAGAACCTC ACGCCCGAGG ACCACATCGC CTTCGCACGC CGCTGGGGCG ACATCGTCGT CAACAGGTTC TTCACGCCGA CTCAAAATCC GCTCATCGCC GAGGTGCGGA AGGAGAAGGA GCAGACCGTC AATATCGGTG GCGGCTGGCA CACGGATCAT TCCTACGACG CCGAACCCGC CATGGGCTCC GTGCTCGTCG CGCGCGAACT CCCGGACGAG GGCGGCGACA CCATGTTCGC CAGCATGTAT GCCGCCTGGG ACGCGCTGAC GCCGGGCCTG AAGAAAACGC TGGAGGGCTT GCGCGCCGTC CATTCCAACG CGCATGTCTT CGGCGCCGCC GGCTTCTACA AGAACAGCGA TCAGGGCAAG GGCTTCAAGG GTGAAAATCT CGTCAGCGAA GCCGTCCACC CCGTCGTCGT CACGCATCCC CTGAGCGGTC GTAAGGCGCT CTACGTCAAC CCCGGCTTCA CCACCCATTT CGAAGGCTGG AGCTGGCTGG AGAGCAAGCC GCTCCTCGAC TATCTCTTCG CCCATGCGGC GCGGCCCGAA TTCACCTGCC GCTTCCAGTG GCGCGACGGC TCGGTCGCCT TCTGGGACAA CCGCGCCACC TGGCACTACG CGGTCAACGA CTACCACGGC GAGCGGCGCC TGATGCACCG CATCACCATT GCCGGCGCGC CCCTCCAATA G
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Protein sequence | MGAIEVRKMT GGCGAEVLGA DLAKLSNSDM EAVRQAYVDY GVVFFRDQNL TPEDHIAFAR RWGDIVVNRF FTPTQNPLIA EVRKEKEQTV NIGGGWHTDH SYDAEPAMGS VLVARELPDE GGDTMFASMY AAWDALTPGL KKTLEGLRAV HSNAHVFGAA GFYKNSDQGK GFKGENLVSE AVHPVVVTHP LSGRKALYVN PGFTTHFEGW SWLESKPLLD YLFAHAARPE FTCRFQWRDG SVAFWDNRAT WHYAVNDYHG ERRLMHRITI AGAPLQ
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