| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0775 |
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| Symbol | |
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| ID | 5453762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 839871 |
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| End bp | 841631 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876344 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001412055 |
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| Protein GI | 154251231 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.66382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATATC GTCCGCCCGT CCGCGACATG GCTTTCACGC TGAACGAGGT CGCCGGTCTT
TCGGATCTGC TGGGCAAGGG CGCCTATGAG GATGTCTCTG CCGATCTGGT CGAAGCTGTC
ATGGAGGAGG GCGCCAAGCT CGCCGCCGAT GTCCTCGCGC CGCTCAACCG CTCGGGCGAC
GCCGAGGGCG CGAAGCTGAA AAGCGGAGCG GTATCAGTGC CTTCCGGCTT TGCGGAGGCG
TACCGCAGAT GGGTCGAAGG CGGCTGGGGC AGCCTCGCGG CGACGACGGA ATATGGCGGG
CAGGGCCTCC CCGTCGCGCT CTCCGTCGCC ATGCAGGAAA TGTGGAACGC CGCCTGCCTC
TCCTTCGGCC TCTGCCCCAT CCTCAGCCAG GGCGCCATCG AAGCGCTGAC GGCGCATGGC
ACCGAAGAAC AGAAAAACAT CTACCTCGCC AGGCTCATCT CGGGCGAGTG GACCGGCACG
ATGAACCTCA CCGAGCCGCA GGCAGGCTCC GATCTCAACG CCTTGAAAAC AAAGGCCGTT
CCGCAGGGCG ACGGCACCTA CCGCATCAGC GGCACCAAGA TCTACATCAC TTATGGCGAC
CACGACATGG CCGAAAACAT CGTCCATCTC GTCCTCGCGC GCCTGCCCGA TGCGCCTCCC
GGCACGAAGG GCATTTCGCT TTTCCTCGTC CCCAAATTCC TCGTCAACGA AGACGGCTCC
CTCGGCGCCC GCAACGATGC CTGGTGCATT GGACTTGAAG AAAAACTCGG CATCCATGGC
AGCCCCACCT GCGTCATGTC CTATGGCGAA AATGGCGGCG CCATCGGTAC GCTGATCGGT
CAGGAAAACC GCGGCCTCGC CTGCATGTTC ACGATGATGA ACAACGCCCG CCTCCTCGTC
GGCACGCAAG GCGTCGCCAT CGCCGAAGCC GCATATCAGC ACGCCTTGGC CTACGCGAAA
GACCGCAAGC AGGGTCGCCC GCTCGGCTCC ACCCTCGCAC CCGGCGAAAT GGCGCCCATC
ATCGAGCATC CCGACATCCG CCGTATGCTC CTCACCATGA AATCGCTCAC CGATGCCTCG
CGTGCCATCT GCTACGCAAC GGCCGTCGCC ATCGACGGCG CGCATGCCGG GGATAAGCGT
GAAGAAGCGC AGGCCCGCGC CGATTTGCTG ACACCCATCG CCAAATCCTT CTCCACCGAT
ATCGGCGTCG AGGTCGCTTC CATCGGCGTG CAGATTCATG GCGGCATGGG CTTCATCGAG
GAAACCGGCG CCGCGCAATT CCTCCGCGAC GCGCGCATCC TGCCGATCTA TGAAGGCACA
AACGGCATTC AGGCAATAGA TCTCGTCAGC CGCAAGCTGC CGCTCGGAAA TGGCAGCGTG
GTCAAAAATT TCATCGCCGA AATGCGCGAA ACGGCGCAGC AGGCGCGTTC CTCCAACAAC
AAGCTCCTCG GCGAAATCGG CGGCGCGCTC GATGGTGCGC TTGACGCGCT CGACAAGGCG
ACGGACTACA TGCTCGCCAA TCTGAAATCC GCGCCGAACG ATTGCCTCGC CGGTGCTTCG
CCCTATCTCC GCCTCTTCGG AACGGCGGCC GGCGGCCATT ATCTGGCGCA GAGCGCGCTG
CGCGATCCCG CGGCAAAGGC GCGCCTCGCC CTCGCGCAAT TCTACGCGGC CAACGTGCTT
CCCGCCGTTC ACGGCCTGCT CGCTCCGGCT ACGGCGGGCG CGGATAGTCT CTTCGCGCTG
ACAGCGGATG ATCTGGCCTG A
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| Protein sequence | MTYRPPVRDM AFTLNEVAGL SDLLGKGAYE DVSADLVEAV MEEGAKLAAD VLAPLNRSGD
AEGAKLKSGA VSVPSGFAEA YRRWVEGGWG SLAATTEYGG QGLPVALSVA MQEMWNAACL
SFGLCPILSQ GAIEALTAHG TEEQKNIYLA RLISGEWTGT MNLTEPQAGS DLNALKTKAV
PQGDGTYRIS GTKIYITYGD HDMAENIVHL VLARLPDAPP GTKGISLFLV PKFLVNEDGS
LGARNDAWCI GLEEKLGIHG SPTCVMSYGE NGGAIGTLIG QENRGLACMF TMMNNARLLV
GTQGVAIAEA AYQHALAYAK DRKQGRPLGS TLAPGEMAPI IEHPDIRRML LTMKSLTDAS
RAICYATAVA IDGAHAGDKR EEAQARADLL TPIAKSFSTD IGVEVASIGV QIHGGMGFIE
ETGAAQFLRD ARILPIYEGT NGIQAIDLVS RKLPLGNGSV VKNFIAEMRE TAQQARSSNN
KLLGEIGGAL DGALDALDKA TDYMLANLKS APNDCLAGAS PYLRLFGTAA GGHYLAQSAL
RDPAAKARLA LAQFYAANVL PAVHGLLAPA TAGADSLFAL TADDLA
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