| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0725 |
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| Symbol | |
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| ID | 5454014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 788516 |
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| End bp | 789418 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876294 |
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| Product | peptidase S49 |
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| Protein accession | YP_001412005 |
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| Protein GI | 154251181 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA TCATCGCGCC CTATCTCCCG AGCCCTCTTC GCAAGCGCGT CGCGCCCGAC
TGGGAGCCGA AGCCTGTTGT CGCCGTGGTG CGGCTTTCAG GCACCATCGG CCCCTCGCAG
CCCCTGCGCG GCGGGCTCAA CCTCGCGGCC GTCGCGGCAC CGCTCGAAGC GGCCTTCTCG
ATGAGGAACG TCAAGGCGGT GGCGCTGCTT ATCAATTCGC CCGGCGGCTC GCCGGTGCAA
TCCTCGCTGA TCTACAAGCG CATCCGCGCG CTGGCGGAAG AGAAGAGCGT ACCGGTCTAT
GCCTTCGCCG AAGATGTGGC GGCCTCGGGC GGCTACATGA TCGCCTGCGC AGCGGACGAG
ATCTATGCAG ATGAAAGCTC CATCGTCGGT TCCATCGGCG TCGTCTCGGC GGGTTTCGGT
TTCACCGGCC TGATCGAGAA ACTCGGCGTC GAGCGGCGCG TGCATACGGC CGGCGAGAGC
AAGGCGATGC TCGATCCCTT CCAGCCCGAG CGGGAGGAAG ATGTCCGCCG CCTTGAGGCG
CTGCAGCTCG ATGTCCATGA GAACTTCAAG AAGCTGGTGC GCGGCGCGCG CGGCGAGAGG
CTGAAGGCGG ACGACCCGGC GATCTTCTCC GGCGAGTTCT GGGCTGGGCA GGGCGCGGTC
GAACGCGGCC TGATCGACGG GCTGGGCGAC GTCCGCAGCA AGATGCGGAG CCTCTTCGGC
GAGAATGTGA AATTGCGGCT CGTTTCGCCG CGCACGCCCT GGTGGCGGCC CGGCGGCGGC
ATCGCTTCCA GCCGATTCGG CGGCCTGTCC GAAGGATTTG GGGCCGGATT CGCATCACAA
ATTGGCGAGG GACTGATCGC CGCAGCCGAG AGGCGTTCCC TTTGGAGCCG TTTTGGCCTT
TAA
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| Protein sequence | MKNIIAPYLP SPLRKRVAPD WEPKPVVAVV RLSGTIGPSQ PLRGGLNLAA VAAPLEAAFS
MRNVKAVALL INSPGGSPVQ SSLIYKRIRA LAEEKSVPVY AFAEDVAASG GYMIACAADE
IYADESSIVG SIGVVSAGFG FTGLIEKLGV ERRVHTAGES KAMLDPFQPE REEDVRRLEA
LQLDVHENFK KLVRGARGER LKADDPAIFS GEFWAGQGAV ERGLIDGLGD VRSKMRSLFG
ENVKLRLVSP RTPWWRPGGG IASSRFGGLS EGFGAGFASQ IGEGLIAAAE RRSLWSRFGL
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