Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0718 |
Symbol | |
ID | 5456881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 780642 |
End bp | 781514 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640876287 |
Product | phage SPO1 DNA polymerase-related protein |
Protein accession | YP_001411998 |
Protein GI | 154251174 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCT CCGGCCCAGA CATGACGCCC GAGGAAGCCG CCGCGCTCCT TTCCTTCTAT GTGGAGGCGG GCGTCACGGA TGCGTTGGGC GATGAGCCGG TCAACCGCTA TGCGCTGGCC GACGAGGCGG CGCGGTCTGC TCCCGTTCCC CTCGCACGCG CGCCCGAAGC GCCACGCACC ATTCGCGCCG ATCCGCGCGG CGAGATGGCG CCGCCGCCTG CCGCCCGCGT CGCCGCGCCC GCCGCCATTC CGCTCGAGGA TGCGCAGGCC GCCGAAAGCG CGCAGATCGC CGCCGCCCGC TGCAACACGC TCGAGGAATT GCGGCAGACG CTGGCGGCCT TCGAGGGCTG CCCGCTCCGC TACACCGCCA AGAACCTCGT CTTCGCCGAT GGCAACCCGC AAGCTCGTAT CATGCTGGTC GGCGAGGCGC CGGGCCGGGA CGAGGATTTG CAGGGCCTGC CCTTTGTCGG CCGTTCCGGC CAGTTGCTCG ACCGGATGCT CGCCGCCATC GGCCTAGACC GGACCTCCGT CTATATCGCC AACACCCTGC CCTGGCGCCC GCCGGGCAAC CGCACGCCCA CCCCCGCCGA GCACGCCATC TGCATGCCCT TCATCGAGCG GCATATCGAG CTCATGGCGC CGAAAGTGCT GCTTCTCCTC GGCGGCGTTT CCGCCAAGCA GCTCCTGCGG ACGGATACCG GCATCATGCG GCTGCGGGGG CGGTGGACCA CGGCGCGGAT CGGCGAATGC GATATCCCGG CCCTGCCCAC CCTCCATCCG GCCTATCTGC TGCGTCAGCC CGCCCAGAAG CGTCTCGCCT GGCGGGATCT CATGTCCTTC CGCGCGTGGC TGGACGAGAC CTCTGCCGAT TAA
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Protein sequence | MNRSGPDMTP EEAAALLSFY VEAGVTDALG DEPVNRYALA DEAARSAPVP LARAPEAPRT IRADPRGEMA PPPAARVAAP AAIPLEDAQA AESAQIAAAR CNTLEELRQT LAAFEGCPLR YTAKNLVFAD GNPQARIMLV GEAPGRDEDL QGLPFVGRSG QLLDRMLAAI GLDRTSVYIA NTLPWRPPGN RTPTPAEHAI CMPFIERHIE LMAPKVLLLL GGVSAKQLLR TDTGIMRLRG RWTTARIGEC DIPALPTLHP AYLLRQPAQK RLAWRDLMSF RAWLDETSAD
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