Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0684 |
Symbol | |
ID | 5455596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 745763 |
End bp | 746215 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640876253 |
Product | ribonuclease H |
Protein accession | YP_001411964 |
Protein GI | 154251140 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.746056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTG AGGATATCGT CGAGATATAT ACAGACGGCG CCTGCTCGGG AAATCCCGGC CCGGGCGGCT GGGGCGTTTT GATGATCTAC AAGGATCGCG AGAAAGAGCT TTGCGGCGGC GAACAGGCCA CCACCAATAA CCGCATGGAG CTGATGGCCG CCATCCAGGC GCTCGAGGCG TTGAAGCGCG ACGCGCATGT CCGCATTCAC ACGGATTCCA ACTATGTGAA AGACGGCATC ACCAAGTGGA TTCACGGCTG GAAAAAGAAC GGCTGGAAGA ATGCCGCCAA GCAGCCGGTC AAGAATGCCG AACTCTGGCG GCGACTCGAA GCGGCAATCT CGACGCATCA GGTAAGCTGG CACTGGGTAA AAGGCCATTC CGATCATCCG GAGAACGATC GCGCGGATGC GCTCGCCCGT CAGGGCATGG CGCCCTATTT GCCGTCGAAA TAA
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Protein sequence | MSGEDIVEIY TDGACSGNPG PGGWGVLMIY KDREKELCGG EQATTNNRME LMAAIQALEA LKRDAHVRIH TDSNYVKDGI TKWIHGWKKN GWKNAAKQPV KNAELWRRLE AAISTHQVSW HWVKGHSDHP ENDRADALAR QGMAPYLPSK
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