| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0671 |
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| Symbol | |
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| ID | 5456375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 732192 |
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| End bp | 733148 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876240 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001411951 |
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| Protein GI | 154251127 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.613215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATA CAGCGATCAG CAACCAGCGC GACACCGCCG CCTTCCCCGA AGGCGGCATG
GGAAGCGCAC GCGACTTTTT CGAGCTTCTG AAGCCGCGTG TCATGTCGCT GGTGATCTTC
ACGGCGCTGG TCGGCATTGC CGTGGCGCCG GGCGGCATCC ACCCGGTCAT CGCCTTTACG
GCACTCCTCT GCATTGCCGT GGGCGCGGGC GCGTCCGGCG CGCTGAACAT GTGGTATGAC
GCCGATATCG ACGCGCGCAT GGCGCGGACC GCGAACCGCC CGATACCGGC GGGCCGCGTG
ACGGCGCGTG AGGCCGCGGT GTTCGGCTCG ATCCTTTCGG TCTTCGCCGT GATGACCATG
GGCGTGCTTG TGAACTGGGT GGCGGCCGCG CTCCTCGCTT TCACCATCTT CTTCTATCTC
GTCGTCTATA CGATGTGGCT GAAGCGGCGC ACTCCTCAGA ACATCGTGAT CGGCGGCGCG
GCCGGCGCCT TCCCGCCCAT GATCGGCTGG GCGGCGGTGA CGGGCTCCGT CTCCATCGAG
CCTTTCGTGC TCTTCCTCAT CATCTTCATG TGGACGCCGC CGCATTTCTG GGCGCTCGCG
CTCTACCGGA GCGGCGATTA CGAGAAAGTC GGCGTGCCGA TGCTGCCCGT GGTTTCGGGC
GAAAAGGAAA CGCGACGCCA GATCATGCTT TATTCGCTGG CGCTTGTGCC GGTAACGCTG
CTGCCGGGCT TTCTCGGCTT CGCGGGCGCG CTCTATATGG GCGCGACGGC GGCGCTCGGC
GCGGGCTTCC TGTGGCTGGC TTTCGGCATC TGGCGGACGG AGCCGGGCGC GGCGCAGGAC
AAGGCGGCGA AGCGGCTTTT CGGATATTCG ATTCTCTATC TCTTCCTGAT CTTTTCGCTG
CTGCTGGTGG AGAAGATGCT GGGCCTTGGC GGCACCGCCT TCGCCCTGGC GCTGTGA
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| Protein sequence | MSDTAISNQR DTAAFPEGGM GSARDFFELL KPRVMSLVIF TALVGIAVAP GGIHPVIAFT
ALLCIAVGAG ASGALNMWYD ADIDARMART ANRPIPAGRV TAREAAVFGS ILSVFAVMTM
GVLVNWVAAA LLAFTIFFYL VVYTMWLKRR TPQNIVIGGA AGAFPPMIGW AAVTGSVSIE
PFVLFLIIFM WTPPHFWALA LYRSGDYEKV GVPMLPVVSG EKETRRQIML YSLALVPVTL
LPGFLGFAGA LYMGATAALG AGFLWLAFGI WRTEPGAAQD KAAKRLFGYS ILYLFLIFSL
LLVEKMLGLG GTAFALAL
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