Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0571 |
Symbol | |
ID | 5454448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 628736 |
End bp | 629935 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640876140 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_001411851 |
Protein GI | 154251027 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0910669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAT CCAGCCCGCG CGGAAGCCGC ATCGGCTTTG TCGTCATTCT CGGTGCCTTG ATCGCCTTCG CGCCGCTCTC GATCGACATG TATCTGCCGG CCTTCCCCGC CATCGCCGCG CATTTCAATA CGACCGCGGG CGCGGTGCAG ATGACGCTTG CCGTTTTCTT CATCGGCTTG TCCGTGGGGC AGGGCGTCGT GGGACCCATT ACGGACCGTG TCGGCCGCCT GCCGCCGCTT CTCATAGGCA TCGGCCTTTA TGTCGGCGCA TCGATATGGG CGGCTCTCGC CCCCGACATC GAAAGCCTCA CCGCCGCGCG GCTGTTTCAG GCGCTGGGCG GCTGCGCGGG CATCGTCGTC TCGCGCGCCA TGGTGCGCGA TCTCTTCGAT GAGCGCGGCT CGGCGCAGGT CTATTCGCTG CTGATGCTGG TGATGGGCCT CGCGCCCATT CTCGCGCCGA TGATCGGCGG CTTCATCATC CTGCATCACG ACTGGCACAT GATCTTCTGG GTGCTGGCCG CCTTCGGGCT GGCTTGCGTT CCCGCCGTTA TTTTCGGCCT TGGCGAAACA CTGCCGCGCG AACGGCGGCA GCATGGCGGG CTTCGCCCCG TACTCGGCGC TTATCTGGCG CTTTTTGCCG ACCGGCCCTT CATGGGTTTC GCGCTCGCCA ACGCTTTCAT CTCGGCGGCG ATGTTCGCCT ATATCACCGG CTCGCCCTTC GTCTTCATCG AGCTTCACGG CCTCGATCCC TCCGGCTATG CCATGCTGTT CGGCGCGAAT GCGGCGGGCC TCATATTCGC ATCGCAGGTA AACGCATTCC TGCTGCGGCG GATTTCGGGC CGCCTCATCC TGAAGATCGC GATGGGTGTT CATCTCGCCG CCGTGGTGGC GCTGCTCGGT TTCACCATCT TCATGCCCGG CGCATTCTAT CCGCTTGCCG CCTGCATCTT CGTCGCGGTC GGATGCCTCG GCTTTGTCGG CGCGAATGCG ACGGCGGCGG CGATGGCGCG GGCGGACAGC CATATCGGTT CGGCATCCGC GCTGACCGGC ATCCTGCAAT TCGCATTGGC GGCCGTCTCC GGCGGACTGG TCGGCGCGTT CAATGACGGC ACGGCACTGC CGATGGCGCT GATCATTGCC GGAGCGAGCA TCGCGGCGAC GCTGGCGCGG CTCTCGGCCA GGGAACGCGT GCCGGCCTGA
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Protein sequence | MNASSPRGSR IGFVVILGAL IAFAPLSIDM YLPAFPAIAA HFNTTAGAVQ MTLAVFFIGL SVGQGVVGPI TDRVGRLPPL LIGIGLYVGA SIWAALAPDI ESLTAARLFQ ALGGCAGIVV SRAMVRDLFD ERGSAQVYSL LMLVMGLAPI LAPMIGGFII LHHDWHMIFW VLAAFGLACV PAVIFGLGET LPRERRQHGG LRPVLGAYLA LFADRPFMGF ALANAFISAA MFAYITGSPF VFIELHGLDP SGYAMLFGAN AAGLIFASQV NAFLLRRISG RLILKIAMGV HLAAVVALLG FTIFMPGAFY PLAACIFVAV GCLGFVGANA TAAAMARADS HIGSASALTG ILQFALAAVS GGLVGAFNDG TALPMALIIA GASIAATLAR LSARERVPA
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