Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0563 |
Symbol | |
ID | 5455237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 619195 |
End bp | 620379 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640876132 |
Product | cytochrome c oxidase subunit II |
Protein accession | YP_001411843 |
Protein GI | 154251019 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATC AGCTTTCCGC CATGCCAGCC GGCAAGCCCG GTGAGCCCTG CCGCGAGGAG CGACAGGAGA AGCCCATGCG GCAGCACGGC GTCGGGCGCG GCGAGGCGGA GGCCCCAATT GAGACCGGCG ACCGAGATGA GCATCATCGC GGCAACGCCA TGCGCCCAGC TTGCGACGCG GCCGCGAATG CCGGGCACAA GGAGAAGCTC CGCCGTGCCG ACAAGGCCCG CGCCGATGCC GGAGGCGAAG GCGAAGCCCG CCGCCCAGAG GCCCGCACGG AGCCAGAAGG GATCGGCGCT CCACCAGTAG AAGACATCCG CGCCGAGCGT CGCGATGACG AGGGCTATGG GGAAGTGGAC GCTCATCGCA TGAAGCGGAT GGCCCGCCAC CGCGATGGCG GAGCTGACAT CCATTTCCTC GATCTTCGCC TCGACCGGGT TTTCCGGGTT GTCGGTTTCG CTCATGACAC TTCTCCCATT CGGAAGATAA CCCTTTTGCG GCGCGGTCCG TTCCGTCGCG CGGCGGCGAT TTGCGCGGGC GCGGCGCTTT CCGGCTGCAG CGGCGACCTT TCGGCGCTCG ATCCGGCGGG GCCGGCGGCG CGCGACATAG CGGCGCTCTG GTGGGCGATG CTGGCGGGGA GCGCCGTGCT TTTCCTGCTG GTGATGGGGC TTTTCGCGGC GGCCATGCTG AAGCCCGGCT TCGGCAGCCG CTATGCCGCG AAGACGTGGA TCGTGGCGGG CGGCATTCTC ATGCCTGTGC CGGTGCTGGC GCTGCTGCTC TTCTTCGCCT TCGCGATGGG CGAGCGGCAT CTGCCCTGGC GCGGCGAGCA CAACCCGGTG CGCATCGAGG CGCGGGCGCA TATGTGGTAC TGGGAATTCC ATTACCTCGA CTACCCGGAT GCCGCGCCCA CCATCGGCGT GATGCATATG CCGGCCCAAT ATGATGTCGA TGTGATCGCA ACGAGCGACA ATGTCATCCA CGGATTCTGG GTGCCGCGGC TCGGCGGCAA GGTGGATGCA ACGCCGGGGC ACGAAGCGGC GGTGCGGCTC TATGCGGATA GACCGGGCGC CTATGGCGGC GTCTGCGCGG AATTCTGCGG CACCGGCCAC ACGACAATGA CATTTCGCGT CGAGGCGCAC ACGCCGGAGC AATTCCGCGC GGCGATCGGA GGGAGCGCGC CATGA
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Protein sequence | MEDQLSAMPA GKPGEPCREE RQEKPMRQHG VGRGEAEAPI ETGDRDEHHR GNAMRPACDA AANAGHKEKL RRADKARADA GGEGEARRPE ARTEPEGIGA PPVEDIRAER RDDEGYGEVD AHRMKRMARH RDGGADIHFL DLRLDRVFRV VGFAHDTSPI RKITLLRRGP FRRAAAICAG AALSGCSGDL SALDPAGPAA RDIAALWWAM LAGSAVLFLL VMGLFAAAML KPGFGSRYAA KTWIVAGGIL MPVPVLALLL FFAFAMGERH LPWRGEHNPV RIEARAHMWY WEFHYLDYPD AAPTIGVMHM PAQYDVDVIA TSDNVIHGFW VPRLGGKVDA TPGHEAAVRL YADRPGAYGG VCAEFCGTGH TTMTFRVEAH TPEQFRAAIG GSAP
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