| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0525 |
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| Symbol | |
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| ID | 5454131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 564398 |
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| End bp | 565123 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876092 |
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| Product | hypothetical protein |
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| Protein accession | YP_001411805 |
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| Protein GI | 154250981 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.426488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0754297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCCA TCTTTACACT GACGGCTGCC CTCATTCTCG GCCTCGGTAT TGCGCTTGGT
GGTTATCTGG GTGGTCAGGG GCTCGTGAAA TCGCGCCTCG GCGACCGCTC CGTTTCGGTA
AAAGGCCTTT CGGAACGGGA GGTTAAGGCC GACCTTGCGC TTTGGGCGCT GCGCTTCGTC
GCCACCGGCA ACGAGCTTGC CGAGACGCAA GCCCAGGTCA AAGCCAATGC GACTGCCGTC
ACTAACTTCC TGAAATCGCA CGGCTTTTCG GACGACGAAA TCGAGCTGCA AGCCCCCCAG
GTCACTGACC GTCTGGCCCA GGCTTACAGC AGCGGTCCCG TCGAAAGCCG TTTCATCATC
GCTCAGCAGA TCGTGTTGCG CTCAACCGAC GTCGACAAGG TCGCAGCCGC CAACAAGGAC
ACCAGCGAGC TGGTCGAGCA AGGCGTTGTT TTATCTAACG AATATGGCCC TGTCCGGCCG
TCCTACCTGT TCACCGGCAT CGCTGCCTTG AAGCCCGAAA TGATCGAGGA AGCCACCAAA
CGCGCCCGCG AAGCCGCGGA AACCTTCGCC GCCGATTCAG GCTCCAGCCT CGGCGGCATC
AGGCGCGCCT GGCAGGGCCA GTTCGAAATC CTGCCGCGCG ACAACACGCC CGGCACGCAG
GAGACCGAAC AGGTCGCCAA GACCGTGCGG GTGGTCTCGA CGATCGAGTA TCTTCTGGTC
GATTGA
|
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| Protein sequence | MKSIFTLTAA LILGLGIALG GYLGGQGLVK SRLGDRSVSV KGLSEREVKA DLALWALRFV
ATGNELAETQ AQVKANATAV TNFLKSHGFS DDEIELQAPQ VTDRLAQAYS SGPVESRFII
AQQIVLRSTD VDKVAAANKD TSELVEQGVV LSNEYGPVRP SYLFTGIAAL KPEMIEEATK
RAREAAETFA ADSGSSLGGI RRAWQGQFEI LPRDNTPGTQ ETEQVAKTVR VVSTIEYLLV
D
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