| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0497 |
|---|
| Symbol | |
|---|
| ID | 5454598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 536029 |
|---|
| End bp | 536946 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640876063 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001411777 |
|---|
| Protein GI | 154250953 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3662] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.414796 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGG GAAGCGAAGC GAGAGAAACG ATGGAAAGGC GCGACACGAC GGAGGCGCCG
CAGCGCGATT ACAGCAGCCC TCTGCCGCGA ATGGACTTCA CGGTCCCCCA AGGCGATCCC
GGGCTGCTGG GACCGAACTC CATGGGCTGG AAGGTGAGCG CCAATCCGAT CGTGAGCGCC
GTCGGCGGCA TCGCGGCGGT GATCCTCGAA CTTGCCGAGA AACATGTGCG CGCGGGTGTA
TGGGATCATT CGACCTTCAA GGTCGATCCG ATCCGCCGCA TGGAGCGGAC AGGCATGGCG
GCGGCGGCCG TGACCTATGG GCCGACGAAA ATGGCGCAGC AGACATTCGA CCGCGTGACG
CGCATGCACC AGCGCGTGAC GGGAACGACG CATGATGGCG ACGCCTATCG GGCCATGGAG
CCTTCGCTTC TGACATGGGT GCATGTGACG GCGGCATGGG GCTTCCTCAA TGCCTACAAG
CGCTATGCGA ACCCGAAACT CTCCCGCGAA GACGAGGACC GCTATTACCG CGAAGGCGAA
GTGATCGGCA AAGGCTTCGG CGCGGAATGG GTGCCGACGT CCATGATCGA GATGGATGCC
TATATGACGG AGATGACTCC GAAACTTTAT GCCAACGACA CCGTGCATGA GTTTCTGGAG
CTGGTACGGA ACGCGACGCC CCTCGGCAGC GCGGGCAAGC CCGTGCAACG GCTCATCACG
CAGGCGGCGA TCGACCTGCT GCCGAAGCAT CTGCAGGAAC AATGCGGGGT TGCGGTTTCC
CCAGCGGCAA GGCCGATGGT ACGCCCCGCC GTCCGCGCGC TTGCCAACAC GGCGAGCTTC
GCGATGCGCT TCGCAACGAA TTCGCCCGCG CATCAGGCTT GCCGCCGCAT GGGAGTCTCG
ACAGACTGTC TGCGCTGA
|
|---|
| Protein sequence | MSLGSEARET MERRDTTEAP QRDYSSPLPR MDFTVPQGDP GLLGPNSMGW KVSANPIVSA
VGGIAAVILE LAEKHVRAGV WDHSTFKVDP IRRMERTGMA AAAVTYGPTK MAQQTFDRVT
RMHQRVTGTT HDGDAYRAME PSLLTWVHVT AAWGFLNAYK RYANPKLSRE DEDRYYREGE
VIGKGFGAEW VPTSMIEMDA YMTEMTPKLY ANDTVHEFLE LVRNATPLGS AGKPVQRLIT
QAAIDLLPKH LQEQCGVAVS PAARPMVRPA VRALANTASF AMRFATNSPA HQACRRMGVS
TDCLR
|
|---|
| |