Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0466 |
Symbol | |
ID | 5456013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 505563 |
End bp | 507392 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640876032 |
Product | hypothetical protein |
Protein accession | YP_001411746 |
Protein GI | 154250922 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCGA GCAAGCGAGG ACGCCACCTT TGCGGGCTTC TTGTATCCGG CATGCTGACT GCCGCATACG CGGGCCCCGC AGCCGCAGTG GAATACAATT TCGGCGAAGC AACACTGTCG ATCGACTCGA TCGCATCCGT CGGCATGACG ATGCGCGTGT CGAAGCAGGA CTGTATGTAT ATCGCGGTGG TGAACGGCGG GTGCCCGGAC GGCATCGGCC AATCGGCCAA CATCAATACC GATGACGGCA ATATAAACTT CGACCAGTGG GATATCGTCT CGGCGCCGGT GAAGGTCGTC AGCGACGCAG AACTTCGCTG GAAGAACTTC GGTGCATTCG TGCGCGCCAA GGCCTACTAC GACTACATCG TGCACGAGGA AGCCGGAACC AACTCCACGG ACTACGGCGT CCGGCCGCTT ACCGACGCGC TCCGCGGCGA CGATGCACGG AACGCAGCAC GCGGCGTGGA TTTGCTCGAT GCTTTCGTCT TCGCGGATTT CGATGTTGGC AGCGTGCCCA CATCGGTTCG CTTCGGCAAA CAAGTGATCA ACTGGGGCGA AAGCCTTGCC ATTCAGGGCG GCATCAACCA GTTCAATGCC ATCGACGTTG CCGCCATCCG CCTGCCGGGT TCAGAATTGA AGGAGGCGCT GACGCCGGAG GAAAGCATAT ATGTGAACGT TGTGCTTCCG GCCAACTTGA GCTTCGAAGC ATTTTACGCG TTCAACTGGC GGCAGACGGA ACTCGACCCC GTGAGCACCT TTTTCTCGGG CGCGGATATT GTCGGGCCGG GTGGCGCCTA TGTGAATACG GTGATCCCCG AGCAGCCCAA TCCGAACACG GCAGCAACGC TCTATCGAGC GCCCAGCGAC GAGCCCGACG ATCAGGGCCA GTTCGGCACC AAGCTTGGTT ACTGGGCGGG ATGGCTCAAT GGCGGTACGG AGCTGGGGCT TTACTATGTG AACTACCACT CCAAGGCGCC ATTCATCGAG TACAGCAACG GCTTCCCGCC CGCTATCGCC GGGCTCGTGG GCGGCCTCGC GGGCGGGTTC CCGGCCCAGT ACTACCGAAC CGCTTTTCCG GAGGACATCG AATATGTCGG TACGAGCTTC GCGACCACGG TTGCGGGCAC GGCGGTGGCC GGCGAAGTGC TCTATTCATG GAACACGCCC TTTCAGATTT CCTCTTCGGA AATCCTGGGT GCGCGATGGA TCGACAATTC GTCGGGCGGC CTCGCGGGCG CCACGGTACT GCCTTACGAC ATGACGCCGG GAGCCTTTCC GGCGGGGTAT TTCCGCGAGG ACGTGATAAC GGGGCAAGTC TCGACCATCA CGATCCTCAA CCCTTCAAAC GCAGTTCCGA AATTCTTCCG GTCGGATCTT GCAATACTGA TTGTGAATGC CGGCTTTCAA TATCTGCCGA GCATCAGCGA TGCACGTCTC TCCGTTCTCA GCGGCGGTCG AGGCTCCGAA ATCTCGCATC CCAATCCTCT GGTGCAGGGC GCGCTGTTCA ACGTGAACCA GGAACTGATT CACGCGGATA CGTTTTCCAG CGGATACCGG GTTATTGCCG GTCTCGACTA CAACAACGTC CTGAACACCC CATGGAAGCT GTCTCCGAAT ATCCAGTGGC AACACGATCT GGGAACCTCG GCGGGCAGTA TCGGACCAGG CTTCCTTCAG GACCGCATGA CGGCATCCGT TGGGGTTACG GCCAACCTGC AGAACGTTTG GCAGGCGGAA CTTCGTTACA CAAATTCCTT CGGTAACAAG TTCCAGAACT ACACACAGGA CCGCGACTTC GTTTCATTCA GCGTGTCCTA CGCTTTCTAA
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Protein sequence | MSASKRGRHL CGLLVSGMLT AAYAGPAAAV EYNFGEATLS IDSIASVGMT MRVSKQDCMY IAVVNGGCPD GIGQSANINT DDGNINFDQW DIVSAPVKVV SDAELRWKNF GAFVRAKAYY DYIVHEEAGT NSTDYGVRPL TDALRGDDAR NAARGVDLLD AFVFADFDVG SVPTSVRFGK QVINWGESLA IQGGINQFNA IDVAAIRLPG SELKEALTPE ESIYVNVVLP ANLSFEAFYA FNWRQTELDP VSTFFSGADI VGPGGAYVNT VIPEQPNPNT AATLYRAPSD EPDDQGQFGT KLGYWAGWLN GGTELGLYYV NYHSKAPFIE YSNGFPPAIA GLVGGLAGGF PAQYYRTAFP EDIEYVGTSF ATTVAGTAVA GEVLYSWNTP FQISSSEILG ARWIDNSSGG LAGATVLPYD MTPGAFPAGY FREDVITGQV STITILNPSN AVPKFFRSDL AILIVNAGFQ YLPSISDARL SVLSGGRGSE ISHPNPLVQG ALFNVNQELI HADTFSSGYR VIAGLDYNNV LNTPWKLSPN IQWQHDLGTS AGSIGPGFLQ DRMTASVGVT ANLQNVWQAE LRYTNSFGNK FQNYTQDRDF VSFSVSYAF
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