| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0462 |
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| Symbol | |
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| ID | 5455202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 498850 |
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| End bp | 500643 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876028 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001411742 |
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| Protein GI | 154250918 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.29438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATCT ACAAAGCGCC GCTGCGCGAA TATCGCTTTT TGCTGAACGA GCTTCTCGAC
TTCTCGCAAT ATGCGCATCT GCCCGGCTTC GCCGACGCAC CGGCTGATCT CGTGGACGCA
ATTCTCGAAG AAGCGGCAAA GCTGACGGAA GAGGTGCTGC TGCCTTTGAA CCAGATCGGC
GATCGCGAGG GCTGCAAGCT CGAAAATGGC GTGGTGACCA CGCCCACGGG CTTCAAGGAA
GCCTACAAGA CGCTGGTCGA TGGCGGCTGG CCGGCGCTCG TTGCCGATAC GGCCTATGGC
GGGCAGGGGC TGCCGAATGC GCTGGGCGTC ATCTTCAACG AGATGGTGTC CTCCGCCAAC
ATGGCCTTCG GCATGTATCC GGGCTTGAGC CACGGTGCCT ATTCCGCCCT TTCGCAGCAC
GGCACCGATG AGCAGAAGAA GAAATATCTG CCGAAGCTCG TCACCGGCGA GTGGACCGGC
ACGATGAACC TCACCGAGCC CCATTGCGGC ACCGATCTCG GCCTCTTGCG GACGAAGGCC
GTGCCCGTCG GCGACGGGTC CTTCAAGATC AGCGGACAGA AGATTTTCAT CTCCGCCGGC
GAGCACGATC TCGCCGACAA CATCCTCCAC CTTGTCCTGG CCCGCATCGA AGGCGCGCCC
GCCGGCGTCA AGGGCATCTC GCTCTTCCTC GTCCCGAAAT TCCTCGTGAA CGAAGACGGC
TCCCTCGGAA ACCGCAACGG CGTCTCCTGC GGATCGCTTG AAGAAAAAAT GGGCATCCAC
GGCAACGCCA CCTGCGTCCT GAATTATGAC GAGGCCATTG GCTGGCTCGT CGGCGAGGAG
CACAAGGGCC TCCGCGCCAT GTTCACAATG ATGAACGAGG CGCGCCTCGG TGTCGGTCTT
CAGGGTCTGT CGCAGTCGGA AGCGGCCTAT CAAAACGCCG TCACCTATGC GCTGGAGCGC
CTTCAGGGAC GTTCGCTGAC GGGCCCCAAG GCGGCGGACA AGGCGGCCGA CCCGCTGATC
GTCCATCCCG ACATTCGCCG CATGCTGCTC GACATCAAAT CCTTCAACGA AGGTGCACGC
GCTCTCCTTG TCTGGACGGC TCTGCACGGC GATCTCTCGC ACCGGTCAGA CGATGAAAAG
ACCCGCGAGT TCGGCGAAGA CATGATGTCG CTGCTGACCC CGGTGCTGAA GGGTTACTTC
ACCGACCGCG GCTTCATGAA TGCTGTCGAC GCGCAACAGG TCTATGGCGG ACATGGCTAT
ATCGAAGAGT GGGGCATGGA ACAGTTCGTG CGCGATGCCC GTATCGCCAT GATCTATGAA
GGCGCGAACG GCGTTCAGGC GCTCGACCTT GTGGGCCGCA AGCTTGCGCA AAACGGCGGC
CGCGCCGTCT TCGCCTTCTT CAAGACAATC GACGATTTCG CGGCGCAGAA CCAGGGCGAC
GAGAAGTTGA AACCTTTTGT GGAGCCGCTC ATCCGCGCCC GCAAGGATCT GGAGGCCGCA
ACGCTCTGGT TCATGGAGAA CGCGCTTCAA AACGCGGATC ACGCAGGCGC CGGCTCCACG
CCCTATATGC ACCTCTTCGG CGTCACCGGC CTCGCTCTCA TGTGGGCCAT GATGGCAAAG
GCCGCGCATG AAAGGCTTGC CACCCTGAAT GGGGGCGACA AGGCCTATTA CGAAACGAAA
ATAAAAACCG GCCGCTACTA CATGGAACAT GTGGTGCCCG AGACGGCGAC GCATCTTGCG
CGCATCCGTC ACGGTGCCGA TCCCATGATG TCGCTGGCCG CGAACGAATT CTAA
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| Protein sequence | MPIYKAPLRE YRFLLNELLD FSQYAHLPGF ADAPADLVDA ILEEAAKLTE EVLLPLNQIG
DREGCKLENG VVTTPTGFKE AYKTLVDGGW PALVADTAYG GQGLPNALGV IFNEMVSSAN
MAFGMYPGLS HGAYSALSQH GTDEQKKKYL PKLVTGEWTG TMNLTEPHCG TDLGLLRTKA
VPVGDGSFKI SGQKIFISAG EHDLADNILH LVLARIEGAP AGVKGISLFL VPKFLVNEDG
SLGNRNGVSC GSLEEKMGIH GNATCVLNYD EAIGWLVGEE HKGLRAMFTM MNEARLGVGL
QGLSQSEAAY QNAVTYALER LQGRSLTGPK AADKAADPLI VHPDIRRMLL DIKSFNEGAR
ALLVWTALHG DLSHRSDDEK TREFGEDMMS LLTPVLKGYF TDRGFMNAVD AQQVYGGHGY
IEEWGMEQFV RDARIAMIYE GANGVQALDL VGRKLAQNGG RAVFAFFKTI DDFAAQNQGD
EKLKPFVEPL IRARKDLEAA TLWFMENALQ NADHAGAGST PYMHLFGVTG LALMWAMMAK
AAHERLATLN GGDKAYYETK IKTGRYYMEH VVPETATHLA RIRHGADPMM SLAANEF
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