| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0399 |
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| Symbol | |
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| ID | 5454241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 432650 |
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| End bp | 433468 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875964 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001411679 |
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| Protein GI | 154250855 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.802217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATAA CAACACTTGC CCGTCGTGGC GAACAGGGCC ACGCTTTGGA CTTGGAACAG
ATTCGGCCTG AGACCGCTCA CACAGAGCAG GGTCAGCCTG AGCGCAGCCA GTTCGAACGC
AGAATGAAAC CGAGCGTCAT GATCGTCGAG GATGAAGAAG CGTTGCTGAC GCTGCTTCAG
TACAATCTCG ACAAGGAAGG CTACAAGGTC ATCACCGCCG CCGATGGCGA GGAGGCGGAC
CTGCTTATCC GCGAGACGAC CCCCGACCTT ATCCTGCTCG ACTGGATGCT GCCGGGCCTC
TCCGGCATCG AGCTTTGCCG CCGCCTGCGC GGCCGCCCCG AAACCCGCAA TGTGCCGATC
ATCATGATTA CGGCGCGCGG CGAGGAAACG GACCGCATTC GCGGCCTCGA TATCGGCGCC
GACGACTATG TAACGAAGCC CTTCTCGATG ACGGAACTGC TGGCGCGCAT CCGCGCCGTC
ATGCGCCGCA TCCGGCCGGC CCTCACGGAA GACCTCGTGA CCTTTGGCGA CATCGTGATC
GACCGCGCCG CCCACCGGGT GCGCAGGGGC GACCGCGAGG TCCATCTCGG CCCGACCGAA
TACCGCCTGC TCGATCACCT GATCCAGCAT CCCGGCCGGG TCTTCAGCCG CGAGCAATTG
CTGGATACGG TCTGGGGCTC GGATGTCTAT GTCGAAGCCC GCACCGTCGA CGTTCATGTC
GGCCGGCTGC GCAAGGCGCT TAACGACAAG GGCGAGAAAG ACCCGATCCG CACGGTCCGT
TCCGCCGGCT ACTCGCTGGA CGAGCAGTTC CACGAATAG
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| Protein sequence | MAITTLARRG EQGHALDLEQ IRPETAHTEQ GQPERSQFER RMKPSVMIVE DEEALLTLLQ
YNLDKEGYKV ITAADGEEAD LLIRETTPDL ILLDWMLPGL SGIELCRRLR GRPETRNVPI
IMITARGEET DRIRGLDIGA DDYVTKPFSM TELLARIRAV MRRIRPALTE DLVTFGDIVI
DRAAHRVRRG DREVHLGPTE YRLLDHLIQH PGRVFSREQL LDTVWGSDVY VEARTVDVHV
GRLRKALNDK GEKDPIRTVR SAGYSLDEQF HE
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