Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0378 |
Symbol | |
ID | 5454403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 403530 |
End bp | 404645 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640875943 |
Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
Protein accession | YP_001411658 |
Protein GI | 154250834 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCG CGCGCAAACC GCCGCTTGAG CGCATCCCGC CGGAAATTGC CTGCGCCGCC GACTACGAAG CCTTCGCGCG CGAGCGGGTG GAGGAGGGCG CCTGGGCCTA TCTGGACGGC GCCGCCGCCG ACGCGCTGAC CCATGCCGAA AACCTGAAAG CCTTCGCCCG TATTCGTCTC GTCAATCGCG TCCTCGCCGA TCTTGCCGGT GGTCACACGC GGCTGGAGCT TTTCGGCTGC GCCTTCGACC ATCCGGTCAT GGTCGCCCCG GTTGCGTTTC AGAAGCTCGC CCACCCGGAC GGCGAATTGG CGACGGTCAC GGCGGCGGGC GTATTGAAGG CGGGCATGGT CGTCAGCGCC CAGGCGAGCA TGGACATGGA GGAATTGGCG CGTCAGGCGG CGGGCCCGCT CTGGTTCCAG CTCTATATCC AGCCCGATCG CGACTTCACG CTCCAACTGG TCAGGCGTGC CGAGAAAGCG GGCTACCGCG CGCTCGTTCT CACCGTCGAT GCGCCGGTGC ATGGCGCGCG CAACAGCGAG CAGCGCGCCG GCTTTTCCCT GCCGCCGGAT GTCGAGGCTG TGAACCTGAA AGCCATGCGC CCGCTTCCGC CCTACATGGC GGGGCCGGGC GAGAGCGCCG TCTTCGCAAG CCCGCTCCTC GCCGCCGCGC CGGGTTGGAA GGATCTGAAC TGGCTCGCCG CTCATACAAA CCTCCCCATC CTTCTGAAAG GCATACTGCA TCCGGCCGAT GCCGCCCGCG CCGTCGAGGC GGGCGCCTCG GGCATCGTCG TCTCCAATCA CGGCGGCCGC ACTCTCGATA CGCTTCCCGC CGCCATCGAA GCCTTGCCCG GTATCGTCGA GGCCGTGGCG GGCCGCGTGC CGGTGTTGAT GGATGGCGGC GTCAGGCGCG GCACCGACAT TGTGAAGGCG CTCGCGCTCG GCGCGAAGGC CGTGCTGGTC GGCCGCCCGG TCATTGACGG TCTCGCCGCC GCCGGCGCGC CGGGCGTCGC CCATGTGCTC CACATGCTGC GCGCCGAACT GGAAGTGGCG ATGGTGCTCA CGGGATGCCG GACCCTCGCC GACATAGACG CCTCGATCCT GTGGCAAGAT CGTTAA
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Protein sequence | MTSARKPPLE RIPPEIACAA DYEAFARERV EEGAWAYLDG AAADALTHAE NLKAFARIRL VNRVLADLAG GHTRLELFGC AFDHPVMVAP VAFQKLAHPD GELATVTAAG VLKAGMVVSA QASMDMEELA RQAAGPLWFQ LYIQPDRDFT LQLVRRAEKA GYRALVLTVD APVHGARNSE QRAGFSLPPD VEAVNLKAMR PLPPYMAGPG ESAVFASPLL AAAPGWKDLN WLAAHTNLPI LLKGILHPAD AARAVEAGAS GIVVSNHGGR TLDTLPAAIE ALPGIVEAVA GRVPVLMDGG VRRGTDIVKA LALGAKAVLV GRPVIDGLAA AGAPGVAHVL HMLRAELEVA MVLTGCRTLA DIDASILWQD R
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