| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0373 |
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| Symbol | |
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| ID | 5454292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 397968 |
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| End bp | 398720 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640875938 |
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| Product | TonB family protein |
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| Protein accession | YP_001411653 |
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| Protein GI | 154250829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAG CCAACGGAGC GGAGGGCACA GGCCTGACAG GCGTCAGGCC GGCATGGCGT
GCCGGCGCGA TATTCGCGCT CGCGGCTCAT GCGAGCGTTG CCGCCGCTGT GGTGTTCTGG
CCGTTCGGAC ATCAGGCGCC GCCCGAAGTC GCTTCGGCGA TCAGCATCGA GCTTGCGCCC
GTGGTGAGCG CGCCGCCGCA GCCACCGACG GAAGCGCCGC CCGGACCGCA GATGGAGGAA
ACGCCGCCGG AGGAAACGGT GGAGCCGGAA ATCCTGCCGG ACCCGCCGCT GCCGCGCATC
GAACCCGCCG AGCTGCCGCC GCCGCCGGAA AAGACGCCCG AGGAAAAGCC CGAGCCGGTG
CGCGAGGTGC AACTCGAAAC GACTGCGCCG CAATCGTCGC CCGCGCCGAA GGCGGAGACA
GCGGCAGCGC CCGTCAACGC GCCGCCCAGC GCCGCCGAAA TGCGCGCCAT GCCGACCTTC
CAGCAATTGC TGCTGGCGCA TCTCGAGCGC CACAAGAAAT ATCCGCGCAA CGCCAGGCGG
CGGGCGCAGG AGGGAACGGC GCAGCTTTAT TTCGAAATGG ACCGCGAGGG CCGCGTGATC
GAATACAGGC TGGCGGCGAG CTCCGGCCAT GTGCTGCTCG ATGAGGAAGT GCTGGCGATG
CTGAAGCGCG CCGAGCCCCT GCCCGCTCTG CCGGCGGAGA TTCCCGGCAA GACGAAAAGC
TTCCGCGTGC CTGTGGTGTT CAACCTGAAC TGA
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| Protein sequence | MTAANGAEGT GLTGVRPAWR AGAIFALAAH ASVAAAVVFW PFGHQAPPEV ASAISIELAP
VVSAPPQPPT EAPPGPQMEE TPPEETVEPE ILPDPPLPRI EPAELPPPPE KTPEEKPEPV
REVQLETTAP QSSPAPKAET AAAPVNAPPS AAEMRAMPTF QQLLLAHLER HKKYPRNARR
RAQEGTAQLY FEMDREGRVI EYRLAASSGH VLLDEEVLAM LKRAEPLPAL PAEIPGKTKS
FRVPVVFNLN
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