| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0308 |
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| Symbol | |
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| ID | 5455021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 331739 |
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| End bp | 333136 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875872 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001411588 |
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| Protein GI | 154250764 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGGC TAGTCGTCGT TTCCAATCGT GTCGGGCCGG TCAAGGATGC AGCGCGCGCG
GGCGGTCTCG CCGTGGCGCT GGTGGACGCA CTTCGCGCCC GCGGTGGGCT CTGGTACGGA
TGGAGCGGCA AGACGGACAA GCGCGCCGTC GATTACGCCT CGATAGAGGA TGCCGAAAGC
CTTTCCCTCG CCACCGTCGA TCTGACCCCT GAGGAATACG AGGACTATTA CAACGGCTTC
GCCAACCGCT GCCTGTGGCC GCTTTTCCAT TACCGGATCG ACCTCACGGC CTTCGACCGC
CGCTACTATG AAGGCTACCG CCGGGTGAAC GCCAAATTTG CCCGCGTCCT TTATCCGCTG
CTGCGGGCCG ACGACACGAT CTGGGTGCAC GATTATCACT TCCTGGCCTT CGGCAACGAG
CTCCGCCAGA TGGGTGCCGA ACAGCCGATC GGCTTTTTCC TTCACATTCC GTTTCCCGCG
CGCGAAGTAC TGGCGGCCCT GCCGCACCAC GACGCCATGG TGCGGGGCCT TTTCGCCTAT
GATGTGCTGG GCTTCCAGAC GGAACAGGAT TGCGAACGCT TCCGCGACTA TGTCGTGCGA
GAGGCGCACG GTATTGCGAA TGGCGACAAG CTCCACTGCT TCGGCCGCAC CGTCACCATT
AGAGCTTTCC CGATCGGTAT CGATACGGAG GGCTTTGCCG ATATCGCCGC CAACGACAAG
GATGCGCGCC GGCAATTTGA CAAGGTGACG AAGGGGCTTG GCGATCGCAC CCAGATCGTT
GGCGTGGACC GGCTCGATTA CACGAAGGGT ATTGCCGAAC GCTTTCAGGC CTATGAGCGT
CTGCTGCAGG AATATCCCGA TACACGGCGG GAGGTTTCCT ATCTTCAGAT CGCGGCGGCA
TCGCGCGGCG AGGTGCTGGA ATACCGCCAG ATGCGCGAGG AACTCGATGG TCTGTCGGGC
CATATCAACG GCACCTTCGG CGATTTCGAC TGGACGCCGC TGCGCTATCT GAACAAGCCG
CTGCCGCGCC GGGCGCTTGC CGGCCTTTAC CGCGCCAGCA AGATCGGCCT CGTGACACCG
CTCCGCGACG GCATGAACCT TGTCGCGAAG GAATATGTCG CGGCGCAGGA CCCGGAAGAT
CCGGGCGTTC TCATCCTTTC GCGCTTCGCC GGGGCTTCCT ATCAGATGCC GGAAGCGGTT
ATCGTGAACC CTTACGACAG CAAGGGAGTG GCGGATGCCC TGCAGATCGC GCGCTATATG
AGCCTGCAGG AACGCCGCGA ACGCTTTGAG GCGCTGATGA AAAGACTGAG GGCCGAAGAT
GTCGCCCAAT GGCGCGACGA CTTCATGTCG ACGCTCGCTA CCGTGACGCG ACGGCGGACG
ATCTCGGCCG TATCGTGA
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| Protein sequence | MSRLVVVSNR VGPVKDAARA GGLAVALVDA LRARGGLWYG WSGKTDKRAV DYASIEDAES
LSLATVDLTP EEYEDYYNGF ANRCLWPLFH YRIDLTAFDR RYYEGYRRVN AKFARVLYPL
LRADDTIWVH DYHFLAFGNE LRQMGAEQPI GFFLHIPFPA REVLAALPHH DAMVRGLFAY
DVLGFQTEQD CERFRDYVVR EAHGIANGDK LHCFGRTVTI RAFPIGIDTE GFADIAANDK
DARRQFDKVT KGLGDRTQIV GVDRLDYTKG IAERFQAYER LLQEYPDTRR EVSYLQIAAA
SRGEVLEYRQ MREELDGLSG HINGTFGDFD WTPLRYLNKP LPRRALAGLY RASKIGLVTP
LRDGMNLVAK EYVAAQDPED PGVLILSRFA GASYQMPEAV IVNPYDSKGV ADALQIARYM
SLQERRERFE ALMKRLRAED VAQWRDDFMS TLATVTRRRT ISAVS
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