| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0277 |
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| Symbol | |
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| ID | 5453759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 297620 |
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| End bp | 298234 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875841 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001411557 |
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| Protein GI | 154250733 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.128046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGGAG ATGCACGACG CGCGCACCGC TCCGCCCCCG GGGCAGACGC TCCTGAGGGC
GAAGAAAAAG GCCCGGATAT CGGCGCCCGC TTGCGGGAGC TGCGGGTGAT GCATGGCTTT
TCGCAGCGGG AACTCGCGAA GCGCGCCGGC GTCACCAACG GCACGATTTC GCTCATCGAG
CAGAACAGGA TCAGCCCTTC GGTCGGCTCT CTGAAGAAGG TGCTGGACGG CTTTCCGATT
TCCATTGCCG ATTTCCTGAC GCTCGACATG AAGCCGCGCG CGAAGGTTTT CTATCAGGCG
AAGGAACTGC GCGAGATCGC GGGCGGACCT GTGTCGCTGC GCCTGCTCGG CCGCGATACG
CGGGGCCGCG CCATCCAGAT GATGCATGAA CGCTATGCGC CGGATGCCGA TACGGGCGAC
GAGATGCTTT CCCATGCGGG CGAGGAATGC GGCATCGTCA TCTCGGGCGT ACTGGAGCTT
ACCGTGGGCG GAGAGGTTCG CCGCCTGGTC GCGGGCGACG CCTATTATTT CGACAGCCGC
CTGCCCCACC GCTTCCATAA TCCGGGCACG ATAGACTGCG TGGTCGTTTC GGCCTGTACA
CCGCCAAGCT TCTAA
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| Protein sequence | MAGDARRAHR SAPGADAPEG EEKGPDIGAR LRELRVMHGF SQRELAKRAG VTNGTISLIE
QNRISPSVGS LKKVLDGFPI SIADFLTLDM KPRAKVFYQA KELREIAGGP VSLRLLGRDT
RGRAIQMMHE RYAPDADTGD EMLSHAGEEC GIVISGVLEL TVGGEVRRLV AGDAYYFDSR
LPHRFHNPGT IDCVVVSACT PPSF
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