Gene Plav_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0198 
Symbol 
ID5454508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp222759 
End bp223172 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID640875760 
ProductMerR family transcriptional regulator 
Protein accessionYP_001411478 
Protein GI154250654 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG GCGAGGCGGC GGCACGCTCC GGCGTGCCCG CGAAGACCAT TCGATATTAC 
GAAGACATCG CGCTGATCGA GAGCGCGGAC AGGAGCGCCA ACGGCTATCG CGCCTATACG
GAAGAGGATG TCCATACGCT GCGCTTTGTT GCGCGCGCCC GTTCGCTGGG CTTCACGGTG
GCGCAATGCC GCGATCTCCT CGCGCTTTAC CGCGACCGCA GCCGCTCCAG CGCCGACGTG
AAGGCGATCG CCGAGATGCA TATGGAGGAA ATCGACGGCA AGATCGACGG CTTGCGCGCG
ATGCGCGAAA CCCTCGCCAC CCTGACCCGG AAATGCCACG GCGACGACAG GCCCGACTGC
CCGATCATCG ACGAACTCGC CGCCGGAAAG ACGGCGGCCA AAAGAAGCAA ATAG
 
Protein sequence
MNIGEAAARS GVPAKTIRYY EDIALIESAD RSANGYRAYT EEDVHTLRFV ARARSLGFTV 
AQCRDLLALY RDRSRSSADV KAIAEMHMEE IDGKIDGLRA MRETLATLTR KCHGDDRPDC
PIIDELAAGK TAAKRSK