Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0159 |
Symbol | |
ID | 5456503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 173954 |
End bp | 174976 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640875720 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001411439 |
Protein GI | 154250615 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATA CCCTTGTCAA ATCCAGCCCG GAAACACTGC CCGCCGATTG GTACTGGAGC GAGGACGCTT GGCAAATAGA ACGCCGTGAA ATCTGGGCAA AGCACTGGTT CCTGATAGCC CGTACGCAAC AGTTCGATGT AGCGGGCGAT TATGTTTCAG CGACGTTTGC GGGCTACCCG ATTTTCGCGA TCAAAGGCAA GGACGGCTTG GTGCGCGCCT TTCACAATGC CTGCCGCCAC CGCGCTTCCC CCTTGGTGCA AGAATGCGCG GGACATGTGG AGCGACTCAG TTGCCCCTAT CACCGCTGGC TTTACGATTT CGAGGGCCGG CTGCGTGGCG CCCCCACCAT GGAGATCGAC AAGGAGGAGT ACGGACTCTT TCCCATCCGC TGCGAGATAT GGCGCGGACT GGTCTTCGTG TCGCTCGATC TTGCGGCGAT GCCGCTCTCC GGCTGGCTGG CAGATATCGC CACCGCGGCG CTACGCTATC CCCTGGAGGA GATGCAGCTC GCTCGCGAGT TCACGATCGA GGCGGATGTG AACTGGAAAA CCTATGGCGA CAACTATGCC GAGGCATGGC ACATACCTAC GATCCATCCG GGGCTCAACG CAGCGATTGA CATGGCGAGC TATAAAATCG CGACGGTAGG ACATACGCTG CAGAGCCACA TGGCGGACGC GCGTGACGGC GGCAAGACGG ATGGCTTCTG GGTATGGCGG CTGCCGGGGC TCTTTTTCAA TATGTACAAC TGGGGAATGA ACGTCGCGCA GCTCGAACCT TTGGGGCCTC GCCGCATGAA GCTGACCTAT CGCTACTTCG TGAAGGACCT CGATCCGACG AAGCAAGCAG AGCGAGATGC ACTTATCGAC TGGGCCTACA TGGTGGCAAA GGAAGACATC GATATCTGCA TTGCCGTACA AAGAAATCTC GAAACCGGCA TCTACGAACG GGGACGGCTT TCCTCCGTTC ACGAGAATGG TGTCATCCAG TTTCAGGAAA TGGTGGCCTC GGCGCATCGT TGA
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Protein sequence | MSDTLVKSSP ETLPADWYWS EDAWQIERRE IWAKHWFLIA RTQQFDVAGD YVSATFAGYP IFAIKGKDGL VRAFHNACRH RASPLVQECA GHVERLSCPY HRWLYDFEGR LRGAPTMEID KEEYGLFPIR CEIWRGLVFV SLDLAAMPLS GWLADIATAA LRYPLEEMQL AREFTIEADV NWKTYGDNYA EAWHIPTIHP GLNAAIDMAS YKIATVGHTL QSHMADARDG GKTDGFWVWR LPGLFFNMYN WGMNVAQLEP LGPRRMKLTY RYFVKDLDPT KQAERDALID WAYMVAKEDI DICIAVQRNL ETGIYERGRL SSVHENGVIQ FQEMVASAHR
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