| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0096 |
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| Symbol | |
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| ID | 5454616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 98980 |
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| End bp | 100665 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875655 |
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| Product | YidE/YbjL duplication |
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| Protein accession | YP_001411376 |
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| Protein GI | 154250552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0519277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.835648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCG TCGGTGACAT ATTCCGGCAT TCTCCCGAGA TCGCATTGTT TCTCGCATTG
GCCCTGGGCT ACTGGATTGG AAAATTCCAG TTCGGCAAGT TCCAGCTCGG CGGCGTGGCC
GGAACGTTGC TGGCCGCTGT GGCGATCAGC CAGTTCGGGG TGCATATCGA CGACGGCATC
AAGGCCGTTC TCTTTGCTCT ATTCATCTAT GCCGTCGGCT TCGAGAGCGG CCCTCAGTTC
TTCCGTTCTC TCGGCAGACA CTCGATCCGC GAGATCGTCA TGGCGGCGGT TCTGGCGATT
AGCGGATTGG CAACGGTGAT CGTGCTCGCC AAGCTCTTCG AGCTGGACAA GGGCATTGCG
GCCGGCATCG CCGCTGGCGG TCTCACCCAG TCGGCGATCA TCGGCACTGC CGGCGCGGCG
ATCGAGAAAC TTGGCCTTGC CGCGGACGAA GCGCAGCGGC TCCAGGCCAA CGTCGCGATC
GGCTATGCCG TGACCTACAT TTTCGGTTCT TTCGGCGCGA TTATCATCTG CGTCAACATT
CTTCCCTGGT TCATGGGACG AGGTATTCGC GACGATGCCG TGAAAGCCGA AGCTGAAATG
CTGAAGGGCG CGCGCATTTA CGGCGCGGGG GAAGCGCCGG CTTTGCCCGA ACTTTTCGGC
CGCGTCTATC GCATCCAGAA GGCGTCAGGC CAAACCGTAT CGGCAATCGA GAGCGCCGCC
ACCAACGGCC CCATCACCAT CGAACGCGTC AAGCGCAAGG GAAAGATCAT CGGCATCGAA
CCAGATCTCA AGCTGGAGAC GGGCGACTTC GTCCTTGTTG TCGGCCGCCG GTCCGGCATC
GTCGGCCTGG ACGACAGGCT AGGCCCGGAA TCGCCGGGGA CGGAAGGCAT GGAACTGGTC
ATGACGACAC GCGATATCGT AATCACCGGC AAGAATTTCG TCGGCCGGTC CGTCGGGCAA
ATCATTGCCG AAAACAGCAG CCTGCGCCAC GGCATCTATG TGCTGGCCGT GACGCGCGGC
GGGACGAAGC TGGACCTGAA GAACGACACC ATGATCCGGG CGGGCGACAT CGTTACTATC
CATGGCGTCC AGGAAGACCT GCAACGGCTG GTGGGCGAGG TCGGACCCGC CATCATTCCC
AGCGACAAGA CAGATTTCGT CTTCCACGGG CTCGGGCTGG TCGCTGGACT GTTGATCGGC
CTGCTGGTCC TGCGCATCGG CTCCACACCG CTTACGCTCG GAGCCGGTGG CGGCGCGCTT
CTCGCCGGCC TGATCTTCGG CTGGTACCGC AGCCGGCATA TGACAATGGG CAACATGCCG
ACGGCTGCGT CCACCTTGCT GCGTGACCTC GGCCTTGCCG GCTTCGTCGG CGTGGTCGGG
CTGCAGTCGG GGCAGCAAGC GGTGCAGACG GTCATGGAAA GCGGGCTTTC GATCTTCCTG
ATCGGGGTGG TCGTCACCGT CCTGCCGCTC CTCATCACGA TGATCGTAGG CCGTTATGTT
CTGCGTTACG AAAACGTAGC GGTGTTCGCA GGCGCGCTGT CTGGATCGCG GAGCGCCAAT
CCAGCATTCG GCGAAATCCT GGACAAGGCC GGCAACTCCG TCCCCACCGC GCCCTTCGCC
ATCACCTATG CCCTCGCAAA TGTTTTCCTG ACGCTGCTTG GCCCGCTGGT CGTGGCGTTC
GTCTGA
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| Protein sequence | MAFVGDIFRH SPEIALFLAL ALGYWIGKFQ FGKFQLGGVA GTLLAAVAIS QFGVHIDDGI
KAVLFALFIY AVGFESGPQF FRSLGRHSIR EIVMAAVLAI SGLATVIVLA KLFELDKGIA
AGIAAGGLTQ SAIIGTAGAA IEKLGLAADE AQRLQANVAI GYAVTYIFGS FGAIIICVNI
LPWFMGRGIR DDAVKAEAEM LKGARIYGAG EAPALPELFG RVYRIQKASG QTVSAIESAA
TNGPITIERV KRKGKIIGIE PDLKLETGDF VLVVGRRSGI VGLDDRLGPE SPGTEGMELV
MTTRDIVITG KNFVGRSVGQ IIAENSSLRH GIYVLAVTRG GTKLDLKNDT MIRAGDIVTI
HGVQEDLQRL VGEVGPAIIP SDKTDFVFHG LGLVAGLLIG LLVLRIGSTP LTLGAGGGAL
LAGLIFGWYR SRHMTMGNMP TAASTLLRDL GLAGFVGVVG LQSGQQAVQT VMESGLSIFL
IGVVVTVLPL LITMIVGRYV LRYENVAVFA GALSGSRSAN PAFGEILDKA GNSVPTAPFA
ITYALANVFL TLLGPLVVAF V
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