| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0095 |
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| Symbol | |
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| ID | 5455864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 97370 |
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| End bp | 98962 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640875654 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_001411375 |
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| Protein GI | 154250551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0859207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.737001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT ACAGCCAGTT CGCGAAACTC AGCCCCTTCG AACTGAAGGA CGAACTCATC
AAGCTGGCGT CCGGACAGAA GAACCGGACG ATGCTCAATG CCGGGCGCGG CAATCCCAAT
TTTCTCGCCA GGCTGCCGCG TCGCGCCTTC TTTCGGCTCG GCCTGTTCGC GACGGCGGAA
TCGGAACTCT CTTTTTCCTA CATGCAACAG GCGGTGGGCG GTCTGCCTCG CATCGACGGC
ATCGAGGCGC GTTTTGAGCG TTTCACAAGT GAAAACCGCG ATCAGGAAGG CGTCGAGTTC
CTGCGCCGCG CCCTGAGCTA TGTGCGAGAC CAGATGGGGC TTTCGGCCTC CGATTTCCTG
CATGAGATGG TCGAAGGGGT CCTGGGCTGC AATTACCCGA TGCCGCCGCG CATGCTGCGC
ATGAGCGAGG AGGTCGTCCG CCACTACCTG ATGAAGGAGA TGGCCGGTGG ACGCGTTTCA
GCCAAGGACG TCGATGTCTT CGCCGTCGAA GGCGGTACGG CGGCGATGAC CTATATCTTC
GACTGCCTGA AGCAGAACCG GCTCGTGACA GCGGGCGACA AGGTAGCTAT CGGAATGCCG
GTCTTCACGC CCTACATCGA AATACCGGAA CTGGACGTCT ACGGCCTGAA GGAAGTCGCC
ATCAACGCCG ACCCGGATGC CGGCTGGCAA TATTCCGATG CCGAGCTGGA GAAGTTGAAG
GACCCGGCGA TCAAGATTTT CTTTTGCATC AATCCGAGCA ATCCACCCTC GGTGAAGCTC
GACGGGCGCA GCATGGAAAA GATCGGCAAG ATCGTGAAGA AAGACCGGCC CGATCTGATG
ATCCTGACCG ACGACGTCTA CGGCACATTC GCCGACGATT TCCAGTCGCT GTTCGCCGCG
TGTCCGCGCA ACACGATCCT GGTCTATTCC TACTCGAAGT ATTTCGGCGC AACGGGATGG
CGCCTCGGCG CCGTGGCGCT TCATCGGGAC AACGTTCTCG ATAAAGCCCT CGCCAAGCTG
CCGAAAAATG CCAAAGCGAC GCTCGACCGG CGCTATTCGT CGATCGTGAC CGACGTCTCC
GCATTGAAAT TCATCGACCG GCTGGTCGCG GACAGCCGCA CGGTGGCGCT CAACCACACG
GCCGGCCTGT CCACACCGCA GCAGGTGCAG ATGGCGCTGT TCTCGCTGTT CGCGCTGATG
GACGAGAAGG ACAGCTACAA GGCGACGCTG AAGGCGCTCA TCCGCAGAAG GCAGGCCGCG
CTCTATGCCG AACTCGGCGT CGAGATGCCG GACAACGGAA ATTCCGCGGA CTACTACACT
CTGCTCGACC TGGAAAAGAT TTCGAGCAAG CTCTACGGCA AGAAATTCGC CGCATGGGTG
AAAAAGGAGT TCTCGGCCAA TGAGCTCCTG TTCAGGATCG CCGAAGAGAC GGGCACCGTG
CTCCTGCCAG GCCGCGGCTT CGGCATGGAC CACCCTGCCG GGCGGGCTTC GCTTGCCAAC
CTGAACGAGT ACGAATATGC CGCAATCGGC CGTTCGCTTC GCAAGATGGC TGACGAGTAC
TACGCCGAGT ACATGAAGAA GAACCGCCAC TAG
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| Protein sequence | MTDYSQFAKL SPFELKDELI KLASGQKNRT MLNAGRGNPN FLARLPRRAF FRLGLFATAE
SELSFSYMQQ AVGGLPRIDG IEARFERFTS ENRDQEGVEF LRRALSYVRD QMGLSASDFL
HEMVEGVLGC NYPMPPRMLR MSEEVVRHYL MKEMAGGRVS AKDVDVFAVE GGTAAMTYIF
DCLKQNRLVT AGDKVAIGMP VFTPYIEIPE LDVYGLKEVA INADPDAGWQ YSDAELEKLK
DPAIKIFFCI NPSNPPSVKL DGRSMEKIGK IVKKDRPDLM ILTDDVYGTF ADDFQSLFAA
CPRNTILVYS YSKYFGATGW RLGAVALHRD NVLDKALAKL PKNAKATLDR RYSSIVTDVS
ALKFIDRLVA DSRTVALNHT AGLSTPQQVQ MALFSLFALM DEKDSYKATL KALIRRRQAA
LYAELGVEMP DNGNSADYYT LLDLEKISSK LYGKKFAAWV KKEFSANELL FRIAEETGTV
LLPGRGFGMD HPAGRASLAN LNEYEYAAIG RSLRKMADEY YAEYMKKNRH
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