| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0079 |
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| Symbol | |
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| ID | 5456552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 78675 |
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| End bp | 80807 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875638 |
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| Product | histidine kinase |
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| Protein accession | YP_001411359 |
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| Protein GI | 154250535 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.480201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.629381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTGC AGGATCGCCC GAACGAAAAA CCCGAAGCAT CGCCCGCCGA TCTTGTCTCC
TCGCTCGCGG AAGCGTCATT GGCCCTCGCG CGTGCAGCCT CCGAAGGCGA GGCTTATGCG
GCGCTTGATA TGGCCGCCCA CCGCCTTGCC GCTCTTTCGT CCGGCCGCGT CTCCATCTGC
GAGCTCGGCA TGTCGCCCAA CGGACGGGCG CTCATCCTCT GGCAATCGTC CCGGGGCGGA
TTGTCGATCG GCGAAGACAG TCTCTTCGCT GAATGGTACA CGCGCGCTTC CCGAATGGGC
GGCGAGATGA CCCCCGCACG CGGGCATATC TGGTATGGAC TTCTCTCCGC CGATACGCTC
AATGATGAAA CCGGCATCCG CGTGGCGATT TTCCTGAAAT TCGACGAGAT GAAGGAAGAG
CTGGCGGCAC ATGCCTATGG CCTCGCGGAT ATCGCGGCCG CTGTCGCATT GCGCATCCGA
AAGCAAAAGG CGGCCGCACT CGAGCGGCGC CGCTTCGATG GTATGTATGA GACGACAAGG
GCCTGGCTGG AGCTTGGTGC CGATATTGTT TGGGAAGCAT CGCCGGAGGG CATCCTCCGT
TGCCGCCGCA TTCTCAATCG GCGTGGCGAC ATCAGCCGCC TGGTCGATGG CATGGATTTG
CGATCGTTGC GCATCGGCGG CGGCGGCCAG AGCCTGCTGG ACTTCCTCGA ACAGCAAGGC
AGCGTCCGTC ACATGCGGGC CCACCTGCCG GAGGACGCGC AAGGCCGCAT GTCGACCGGC
GAAACGCTTT ATGTCTCCGC AACGGCGCGC CGCTCGCCGG ACGAGGACGC TCCCTATATA
GGCACCTTCA CCGCCATCGG CCGCGATGCA CCATCCGATG GAACGCGGGA AACCGCCACC
ATGCTTTTAC AGATGCGGGG CGCCCGCATC CGCGAAGAAC AGCATCGGCG CGAAGCCGAA
GCCATGCTCC AGGGACTGCG CCTCCTGCTC AGTCAGGATT CCTCGCGCGA AAAGATGTCG
CGCCTTGTCG GCCTTGTCGG CGAATGCATC GGCAGCAGCG ATGCCTGCGT CGCTGAAAAA
GGGCTCGATG GAAAAGTACG CATTCTGGTT CCGCAGCAAA AATCGCCGGG ACCGGGAGCG
GCCGCCGCCC TCGATTTCAT CGCCGCCGGC GCGCCGCGAG GTGTCGTCGG CGTCTACGAC
ATCGATGCGG CGGAGGGGCG CAATATCGCC GATGCCTTCG GCCTTGAGGG CTGTCAGGTC
GCGGCCCTCG CGCTGCCGCT GCGGGGCGAT GCCGCGTTTC TTGTTTGCGT CACGCGCCGC
GCGGAAGGGT TCGCTCCCGC CGATCTCGAT TTTGCAGACA GGTTCGCCTT GCTCCTCCGC
CAGGCCTTGC TTCTGCGCGA GGAGCAATCG CATTTGGCAC AAACGGCCAA GATGGCGGCG
CTCGGACAGA TGTCCGCCAG CATCGCGCAT GAGCTGCGCC AGCCGCTCAA TACCATTTCG
CTCGCCGTGC AGAACCTCGA ATTCCTGCTG GAATCGCTGG ATTTCGACAG GGAAGCGGCG
GCAAAAAAGA CAAAGCGCGT TCTCGCGCAG GTCGAGCGCG CAAGCGACGT CATCGACCGC
ATGCGCCGCT TCGGCCGCAA AAGCGTCGGC GAACATGCCT CGCTTGTGCT GCGCAATGTC
ATCGAGAATG TCGAGGCGAT CATGCATCAC GTTCTGCTGC GCGCCGGCGT TCGCCTCGAG
GTGGAAATCT CGCCGGACGT CACAGCCTAT GCGGATCAGC TTCAGCTGGA ACAGGTGATC
GGCAACCTGT TGCAGAATGC CGTCGATGCC ATTTCCGGCA TCGGTGCGAA GCATGAGCGC
GCCGAGGGGT TGATAAAAAT CACAGCCTCT CCCTCGCCGG ACGAAAAGGG CATGACGGTG
CTGCGTGTCG AGGATAGCGG CCCCGGCTTC CGGCCCGAAA TCGCGGAACG TGTGCTGGAG
CCGTTCTTCA CGACGAAATC GGCCGAGCAC GGTACTGGCC TTGGGCTCGC CATCTGCGAC
GCCATCATCC GTGAAAGCGG TGGCCGCATC GAAATCGGCA ATCACGCCGC AGGCGGCTTT
GTCCAGATCG TCCTGCCGCG CCAGCCGGCG TGA
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| Protein sequence | MALQDRPNEK PEASPADLVS SLAEASLALA RAASEGEAYA ALDMAAHRLA ALSSGRVSIC
ELGMSPNGRA LILWQSSRGG LSIGEDSLFA EWYTRASRMG GEMTPARGHI WYGLLSADTL
NDETGIRVAI FLKFDEMKEE LAAHAYGLAD IAAAVALRIR KQKAAALERR RFDGMYETTR
AWLELGADIV WEASPEGILR CRRILNRRGD ISRLVDGMDL RSLRIGGGGQ SLLDFLEQQG
SVRHMRAHLP EDAQGRMSTG ETLYVSATAR RSPDEDAPYI GTFTAIGRDA PSDGTRETAT
MLLQMRGARI REEQHRREAE AMLQGLRLLL SQDSSREKMS RLVGLVGECI GSSDACVAEK
GLDGKVRILV PQQKSPGPGA AAALDFIAAG APRGVVGVYD IDAAEGRNIA DAFGLEGCQV
AALALPLRGD AAFLVCVTRR AEGFAPADLD FADRFALLLR QALLLREEQS HLAQTAKMAA
LGQMSASIAH ELRQPLNTIS LAVQNLEFLL ESLDFDREAA AKKTKRVLAQ VERASDVIDR
MRRFGRKSVG EHASLVLRNV IENVEAIMHH VLLRAGVRLE VEISPDVTAY ADQLQLEQVI
GNLLQNAVDA ISGIGAKHER AEGLIKITAS PSPDEKGMTV LRVEDSGPGF RPEIAERVLE
PFFTTKSAEH GTGLGLAICD AIIRESGGRI EIGNHAAGGF VQIVLPRQPA
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