Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0040 |
Symbol | |
ID | 5456055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 44147 |
End bp | 44794 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640875599 |
Product | dethiobiotin synthase |
Protein accession | YP_001411320 |
Protein GI | 154250496 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCTG TCTTCGTCAC CTCCTCCGGC ACGGAAATCG GCAAGACCTA TGTCTCCGCC ATGCTGACGC GCGAGCTGAA GGCCCGCGCC CTGAAGCCGC TGGTAAGCGG CCTTGACGAG GCGACATTCG CGGAAAGCGA TCCCGCGCAA TTGCTCGCGG CCATGGGCGA GAAGGTGACT TACGAGAACG CCGGCCTCGT CTCGCGCTGG CGCTTTCGCG AGCCGCTCTC GCCCGACATG GCGGCAAGGC GCGAGGGCCG CGAGATAAAT TTCGATGAGC TGCTGGAAGA ATGTCTCGCC GCCGCTGCCA TGCCCGGCCC CCTCCTCATA GAGGGCGTCG GCGGATTGAT GGTGCCGCTC GATGCCACGC ACATGGTGCT CGACTGGATG AAGGCGCTCG ATGCGAAAAC CGGCCTCGCC CCCGTCCTCG TCGTCGGCGC CTATCTCGGC ACGATAAGTC ACACGCTGAC GACGCTTGCC GTCATGCGCG CGGAAAATCT CCTGCCGCGC GTCATCGTGG TGAGTGAGAG GGAGCCCGGC CCCGTGCCGG TCGAGGAAAC GGCGGAGACG ATCGCGCGCT TCGCGGGCGG CGTTCCCGTG CGTGCCTTGC CGCGCGGTGG CGCCGTGCCG CTCGCTGCCC TGCTCTAG
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Protein sequence | MRPVFVTSSG TEIGKTYVSA MLTRELKARA LKPLVSGLDE ATFAESDPAQ LLAAMGEKVT YENAGLVSRW RFREPLSPDM AARREGREIN FDELLEECLA AAAMPGPLLI EGVGGLMVPL DATHMVLDWM KALDAKTGLA PVLVVGAYLG TISHTLTTLA VMRAENLLPR VIVVSEREPG PVPVEETAET IARFAGGVPV RALPRGGAVP LAALL
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