Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0023 |
Symbol | |
ID | 5453916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 24241 |
End bp | 25362 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640875582 |
Product | hypothetical protein |
Protein accession | YP_001411303 |
Protein GI | 154250479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00775976 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.0839132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA TTCGCCAGAT CACCAAGGAC AATGCCTATG ACGCCGTCTC GCCGGACGAT TTCGAGGCGA TGATGAATAC CGAGCGCTAC AACCGGCGCT CCTCCGCCTT CGACAAGATC ATCTCGGCGA CCCATGACCA TTTCTGGGAC CCGATGGACA AGCGCTATAT CGACTTCACG GACAGCTTCG ACAGCGAAAA TGAAATGCTG ATCGATCCCG AGCTTGTGCC GGAACTGAAG CTTCCCTCCT TCGAAAAGCT TTCCGAAAAG GAGAAGGTGC GCTTCGTCAA CGAGACCGCG CGCTGGATGA TGTCGGCGAT CCTGCATGGC GAGCAGGGCG CGCTCAATCT CTCCGCCTCG CTCTGCCACA TCCTGCTCGA TCCGGGCGCG CAGGAATACG CCGCCAACCA GGCGCGCGAG GAAGCGCGCC ACGTCACCGC CTTCGCGAAA TATGTGCAGG CCCGGTGGGG CAAGCCGCTT CCCTGCGGCG AGACGCTGGC GAACCTTCTG GCCGAAATGG TCAATGCGAA AGAGGTCTAC AAGAAGATCG TCGGCATGCA GCTTCTCGTC GAGGGCCTGG CGATGGGCAC CTTCGCGACC TTCTTCAACA CGGCGCGCGA CCCGCTTCTC GTGAAGCTCT GCCAGCTCGC CATGACGGAC GAGGCCTTCC ACCACAAGTT CGGCAAGATC TGGGCCGACC GCACGATCCC CAAACTCTCC CAGGAAGAGC GGGACATCAT CGAGGACTGG GCGGCGAGCG TCTTCCAGAC GCTGCTCTTC AACCTCGTGA ACCCTGAACA GAAGAAACTG ATCTATGCCG ATTTCGGCCT CGACTGGAAA CAGGTGCAGG CGGAAATGCT TGAAGCGGTG ACGGATGAAG ACCGGCGCGA GGGCATGAAG GACGCGGCGA ATGTCTTCCG CGTGCTGGTG AAGACGCTGC TCAAGGCGGG CATCATCACC GACCGCACCC GCGCCTTCTA CGCGACCTAT GTCGACATGG AAGAACTGAA GAACGAAGAC GACCGCATGG TCGGCGACGA CATCGCAGAG CAGGGCATCG ACTTCCTGAA GACGGTGAAC TTCGCCAAGA AGAACCTGCT GGCGAACGTC GCGGCCGACT AG
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Protein sequence | MTDIRQITKD NAYDAVSPDD FEAMMNTERY NRRSSAFDKI ISATHDHFWD PMDKRYIDFT DSFDSENEML IDPELVPELK LPSFEKLSEK EKVRFVNETA RWMMSAILHG EQGALNLSAS LCHILLDPGA QEYAANQARE EARHVTAFAK YVQARWGKPL PCGETLANLL AEMVNAKEVY KKIVGMQLLV EGLAMGTFAT FFNTARDPLL VKLCQLAMTD EAFHHKFGKI WADRTIPKLS QEERDIIEDW AASVFQTLLF NLVNPEQKKL IYADFGLDWK QVQAEMLEAV TDEDRREGMK DAANVFRVLV KTLLKAGIIT DRTRAFYATY VDMEELKNED DRMVGDDIAE QGIDFLKTVN FAKKNLLANV AAD
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