Gene Plav_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0021 
Symbol 
ID5453952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp22748 
End bp23236 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID640875580 
Producthypothetical protein 
Protein accessionYP_001411301 
Protein GI154250477 
COG category[S] Function unknown 
COG ID[COG5321] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0469027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0489238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG ACGATCTTCC AGAGCTGCCC GACGTGATGG CGGATGAGTT CCGCCTCTTC 
GACGGCCGTC AATCCGCGAT CGCGGCAAGC GTGCAGCGCG GCTGCTGCCG CCTGCTCGCG
CAGATGGGCT ATGCGGCGGT GACGGAGTTC TCGCTCGCAA CCGGGCGGCG CGTCGACATC
ATGGCGCTCG GGCCGAAAGG CGAAATCATC GTGCTCGAAA TCAAGTCGAG CCTGATCGAC
TACCGGACGG ATGCGAAGTG GGAGGAGTAT CTGGATTTCT GCGACCGCTT CTATTTCGCG
GTGCCGCCGG AATTTCCGCG CGAGATCATT CCCGGAGAAG TCGGCCTCGT CATCGCCGAC
CGCTTCGGCG CGGAAATCCT GCGCGAAGGC CCGCACACGC CGCTGCCGCC CGCGCGCCGC
AAGAAACTGA CGCTCCATGC GGCCCGCGTC TCGGCCCGCC GCGTCCACCG CTTTCTCGAT
CCGGAGTGA
 
Protein sequence
MAKDDLPELP DVMADEFRLF DGRQSAIAAS VQRGCCRLLA QMGYAAVTEF SLATGRRVDI 
MALGPKGEII VLEIKSSLID YRTDAKWEEY LDFCDRFYFA VPPEFPREII PGEVGLVIAD
RFGAEILREG PHTPLPPARR KKLTLHAARV SARRVHRFLD PE