| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0017 |
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| Symbol | |
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| ID | 5455512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 20068 |
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| End bp | 21474 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640875576 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001411297 |
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| Protein GI | 154250473 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00494358 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATGA CCGAAGACCG GAGCTCCATG CATTGGCTGC GCCGGAATTT TCTGGCGGGG
CGCATGCCCG GCGATCCAAG CGGGCAGGTG CGCCTGCAGA CGCTCGTCAT CCTGCGCTGG
CTCGCCATCG CCGGACAGCT CGCCGCCGTG CTTGTCGTTC ATTTCGGCAT GGGTTTTCCG
CTGCCGCTCG GCCTCTGTCT CGCGGTGATC GCCGCTTCCG CCTGGCTCAA TGTTTTCCTG
ACGCTCCGAT ACCGCTCGGC GACGCGCTTG CCCGACTGGC AGGCGGCGGT CTATCTCGCC
ATCGATCTCG CGCAGCTTGC GATCCTGCTG TTCCTGACGG GGGGCTTGCA GAATCCTTTC
GCACTTCTGT TCATGGCGCC GGTGACGATT TCGGCGACGA CACTCTCGCT CCGCAGCACC
GGCTTCCTGC TCGCACAGGC CTTCACCTAT GTGACGCTGC TCTCCTGGTT CCATATGCCG
CTGCCCTGGC GGCCGGGCGA GGAGCCGCAA CTGCCCTCGC TCTATGTGAC CGGCCACTGG
CTGGCGCTGC TGCTCGGCCT CGGCTTCATG GCGGCCTATG CCTGGCGCAT CTCGCAGGAA
TCGCGCCGCA TGTCGGCGGC GCTCTCGGCG ACGCAGCTCG TGCTGGCACG TGCGCAGCGC
CTCTCCGCGT TGGATGGGCT TGCCGCCGCC GCCGCGCATG AACTCGGCAC GCCGCTCGGC
ACCATCTCGC TTGTCACGAA GGAACTGATG CGCGGCCAGA TGGGCGAACA GGAGATGAAG
GAAGACCTCG CGCTTCTTCA CAGCCAGGCG GAACGCTGCA AGGACATTCT CTCGCGCCTG
TCGCGCCAGC CGGATGGCGC CGATGTGATC TATTCGCGGC TGCCGCTCCA CGCGCTGCTG
GACGAGGTCG TCGCGCCGCA TCGCGACATG GATGTGGTCT TCCATATCGA CGTCATCGCC
GACGAGGACG GCGCGAGCGA GCCGGAAATC TGGCGCCGCC CGGAAATGCT CTACGGGCTC
GGCAATTTCA TCGAGAACGC CGCCGATTTC GCGCGCGAGG AAGTGTCCGT GACCGCGCAT
TACGGCAAGG GCCATATCTC GATTGTGATA ACGGATGACG GGCCGGGCTT CGCGCCGGAC
GTGCTGGAAA AGCTCGGCGA GCCCTATGTC ACCACGCGGC CCCGCAAGCG CACCGCCCTT
GCCGACCCGG ATAGCGGCCA TGAGGGCATG GGGCTCGGTT TCTTCATCGG CAAGACGCTG
CTGGAGCGGA CGGGGGCCAC CGTCGAGATC GGCAACCGCA ACGATGCCAG GGCGGGTGCA
CGTCTCGCCA TGCGTTGGCC GCGCCGCGCC ATCGAGGCCG ATCCGGCCTT TCCGGAGCAG
GGGGAAGCGG CCCACAAGGC TGGCTAA
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| Protein sequence | MAMTEDRSSM HWLRRNFLAG RMPGDPSGQV RLQTLVILRW LAIAGQLAAV LVVHFGMGFP
LPLGLCLAVI AASAWLNVFL TLRYRSATRL PDWQAAVYLA IDLAQLAILL FLTGGLQNPF
ALLFMAPVTI SATTLSLRST GFLLAQAFTY VTLLSWFHMP LPWRPGEEPQ LPSLYVTGHW
LALLLGLGFM AAYAWRISQE SRRMSAALSA TQLVLARAQR LSALDGLAAA AAHELGTPLG
TISLVTKELM RGQMGEQEMK EDLALLHSQA ERCKDILSRL SRQPDGADVI YSRLPLHALL
DEVVAPHRDM DVVFHIDVIA DEDGASEPEI WRRPEMLYGL GNFIENAADF AREEVSVTAH
YGKGHISIVI TDDGPGFAPD VLEKLGEPYV TTRPRKRTAL ADPDSGHEGM GLGFFIGKTL
LERTGATVEI GNRNDARAGA RLAMRWPRRA IEADPAFPEQ GEAAHKAG
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