Gene Pisl_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1977 
Symbol 
ID4616530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1793314 
End bp1794420 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content56% 
IMG OID639785068 
Producthypothetical protein 
Protein accessionYP_931467 
Protein GI119873460 
COG category[S] Function unknown 
COG ID[COG5493] Uncharacterized conserved protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.529646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000143313 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTATTG CAGAAGAGGT TAGGAGGGTT TTGCTTGAGC ATCCTGAGAT TATTGCGGAG 
GCTCTTGAGG CTAGGCCTGA GGTTCTCTAC AGGGCACTTG CCAAGCTTAT GCCGTGGCAA
AACCTAGCCA CCAAAGAGGA CGTGAGATCG CTGAGAGAGG AGATCCAGAG GATAGAGGAG
AAGATGGCCA CCAAAGATGA CCTAAAACAC TTGGCAACTA AAGACGACGT CAGTAGGCTT
GAGGAGCGGC TTGAGGAGAC GAGGAGAGAG ATGGCTACGA AGGAGGAGGT TAAGGCTCTT
GAGGCCAAAA TGGCCACCAA GGAAGATCTA AAGGCCTTCG CCACTAAAGA GGATCTAAAG
ACTCTTGAGG CTAGAGTGGC GACGAAGGAC GATCTAAAAG CTCTCGCCAC GAGAGAGGAG
CTGAGGGCTC TCGAGGAGAG GGTGGCCACC AGAGAAGACG TGAGAAGACT TGAGGAGCAA
CTGGGAGAGG TGAGAAAAGT CATGGCTACC AGGGACGATC TCAAGGCCTT TGCCACAAAG
GAGGACGTTA GGAGGCTTGG AGAGCAGTTG GAGGAGGTGA GAAAAGTTAT GACTACGAAG
GAGGATCTTA AGGGCCTCGC CACTAAGGAG GAGCTCAAGG CGCTTGAGGA GAGGATGGCC
ACAAAGAGGG ACGTGGAGGA GCTGTGGAGG GCTATCAACA GGCTGGAGAG GAAGTTGGAC
GCGCTGGGGG CCAGGTGGGG GGTAATCAGC GAGGAGGCGT TTAGGGAGGG CATGAGGGCT
ATGTTGAGGG AGGCCGGGTG GTCCGTGTCT AAGGAGATCC TCTACGACAG GGAGGGCTAC
GTATACGGCA CCCCCTCCGA GGTGGACTAC GACGTGGTGG TCAGAGACGG GAGGCTGATA
ATCGTCGAGA TCACGTCCTC GCTGAAGCGG AGCGACCTGC CCACCATAGT GAAGAAGAGG
GAGCTCTACG AGAGGGCCAG AGGGGCCAAG GTAGCCGCCG TCTACATAGT CACCCCCTAC
ATAGACGACA GATACCCCGA GCGGGTAAAG GCCATGGCCA AAGACCTAGG GCTGGAGGTA
GTCTACCCAA CCCCACCCCA GGAGTAG
 
Protein sequence
MSIAEEVRRV LLEHPEIIAE ALEARPEVLY RALAKLMPWQ NLATKEDVRS LREEIQRIEE 
KMATKDDLKH LATKDDVSRL EERLEETRRE MATKEEVKAL EAKMATKEDL KAFATKEDLK
TLEARVATKD DLKALATREE LRALEERVAT REDVRRLEEQ LGEVRKVMAT RDDLKAFATK
EDVRRLGEQL EEVRKVMTTK EDLKGLATKE ELKALEERMA TKRDVEELWR AINRLERKLD
ALGARWGVIS EEAFREGMRA MLREAGWSVS KEILYDREGY VYGTPSEVDY DVVVRDGRLI
IVEITSSLKR SDLPTIVKKR ELYERARGAK VAAVYIVTPY IDDRYPERVK AMAKDLGLEV
VYPTPPQE