Gene Pisl_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1881 
Symbol 
ID4618302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1700363 
End bp1701094 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content44% 
IMG OID639784970 
Producthypothetical protein 
Protein accessionYP_931371 
Protein GI119873364 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTGGA TTGCCATTTT AGCGGGTCTT TTGGGCGGCC TTCTTGGCCC TCTTATCGGC 
GTAGGAGGGG GCGTGATAAT TGTCCCTATG TTAAATCTAT CAGGTGTGGT CTTTCAAACT
GCAGCGGCGG CAAGTATGTT TTCTATAGTT GTCACATCTG CAGTCGCTGT GTATAATTAC
AGAAAAATGA TCAACTTTAG AGTATTAGCC GGATATATGG CTATATCTCT TTTGGCCGCA
GCCATAAGCG CCGTTGTTTC TGTTAAATAC TCAGGGCCGT GGATTAAATT AGCATATGGT
ATTTACCTAA TAGCAGTTGG CATGGTGCTT TTAAAAAACG CGAGGCCGCG CAGAAATATA
CCTTGGCTAG GCCTACTCCT TATATTTATC GGCGGCTTTG CCTCTTCTCT TTTTGGAGTC
GGAGGAGGCA CGATTTTTGT CCCAGCTCTT ATATTAATCT CAGGCTTTGA CCCCAAGTCA
GCCGCCGCTA TGAGCATGGG TATTATTTTC CCAACTGCAG TATCTTCAAC TACTATATAT
GCAGCATTAG GCGTGCTTAA CCTCCCGCTG GCAGTAGCCA TAGCAGTTGG CAGCTTTATA
GGCTCCTATA CCTCGAGCAG ATATATTATG CCGAAGCTAA AGTCTGGAAC GGTGAGGAGG
CTTTTTGTTA TCTACGTGTT TGTAATAGGT ATTTACTACC TATGGAGTTA TTTTTCCCTG
TCCCTGTCTT AA
 
Protein sequence
MYWIAILAGL LGGLLGPLIG VGGGVIIVPM LNLSGVVFQT AAAASMFSIV VTSAVAVYNY 
RKMINFRVLA GYMAISLLAA AISAVVSVKY SGPWIKLAYG IYLIAVGMVL LKNARPRRNI
PWLGLLLIFI GGFASSLFGV GGGTIFVPAL ILISGFDPKS AAAMSMGIIF PTAVSSTTIY
AALGVLNLPL AVAIAVGSFI GSYTSSRYIM PKLKSGTVRR LFVIYVFVIG IYYLWSYFSL
SLS