Gene Pisl_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1836 
Symbol 
ID4616920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1665200 
End bp1666171 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content48% 
IMG OID639784919 
Productpeptidase M24 
Protein accessionYP_931327 
Protein GI119873320 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.00017843 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATTG TAACAACTAC TGTAAACTTT GCCTACCTAA CGGGAGTTTG GCTAGAGACG 
TACGAACGTT TTAAAGCAGT TATAAAATGT GGAGATTACA CAGCAGTTGT TATCCCCGCG
CTAGATGTAG ATAGAGTGTC TGGGAACGTA TATCCATATA GAGATGGGGA AGATCCAGCA
GAAGCGCTTA GACAAGCTGT TGCCAATTGT ATAGACGACG TCGTTTATAT AGACGGCGGA
ACTACACTCC GCCATTTTGA AATAATCAAG AGAGCCCTTC CCCAGGCTCA GTTTAAACTA
GCCGACGACC TTCTCAAAGA GTGGCGTGCT ATAAAACGCA GAGATGAGGT AGAGAAGATA
AAGGCGGCGG CTGTAAAAAT TAGGCGGGTT ATAGAAAGCC TAGAGACGAC ACCCGGCGTT
TCTGAACGTC AATTCGCCGC CAGAATTTAC ACAGCGCTGT ATGAAGAAGG CCTCGCGCCG
GGGCCCATAT TGGTTCAATT TGGCTCTAAC ACCGCTATGC CACATCTAGA GCCCACAGAC
AAGAAATTAC GGCGTGGAGA CGCCGTGGTG TTAGATATTT CAGCATCCTA CGGCGGATAT
TACGCCGATT TAACTAAGTC GTTTTTCTAC GGAGAACCTC CAGACGAATA TCTAAAGATA
TATGACATAG TAAAGAAAGC TCAACAAGCC GTTCTCAACG CCGTAAGATC TGGCGCGAGA
GCTGCCGATG TAGATAAGGC GGCGCGGGAG GTCATAGAGG CTATGGGGTA CGGCCCCTAT
TTTATACACC GCACGGGACA CGGCCTTGGG CTTGAGATAC ATGAGGCGCC CGACATATCG
CCTAATTCAT CCGACGTGTT AAAGCCAGGG ATGGTTTTTA CAATAGAGCC CGGGGTATAT
ATACCTGGCA AATACGGCGT TAGGCTAGAG ATAGACGTAT ATCTCAGCGA GGGCGGGGCT
GAGGTTTTAT AA
 
Protein sequence
MIIVTTTVNF AYLTGVWLET YERFKAVIKC GDYTAVVIPA LDVDRVSGNV YPYRDGEDPA 
EALRQAVANC IDDVVYIDGG TTLRHFEIIK RALPQAQFKL ADDLLKEWRA IKRRDEVEKI
KAAAVKIRRV IESLETTPGV SERQFAARIY TALYEEGLAP GPILVQFGSN TAMPHLEPTD
KKLRRGDAVV LDISASYGGY YADLTKSFFY GEPPDEYLKI YDIVKKAQQA VLNAVRSGAR
AADVDKAARE VIEAMGYGPY FIHRTGHGLG LEIHEAPDIS PNSSDVLKPG MVFTIEPGVY
IPGKYGVRLE IDVYLSEGGA EVL