| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1823 |
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| Symbol | |
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| ID | 4618197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1657601 |
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| End bp | 1658305 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639784906 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_931314 |
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| Protein GI | 119873307 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00210636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000000000367552 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTTGACA ACCACGTACA CTGTCACGAG TTTCCGAGAG AGGAGCTGGA GAAATACACC
AAGGAGTGGA CCTTAGTCTG TGTCTCAGAC GACTTAGCCA CTTCGAGGAG GACTGTGGAG
CTGGAGGGAG CCGTGCGTTG CGTGGGGATA CACCCCTGGC AGGTAGATAA GGCCGAGCCA
GGGGATCTAG AGGCCGTAGT CCGTCTTGCC GAAAAGGCGG AGGTGCCCTG CGTAGGCGAG
GTGGGGCTAG ACAGGAGGTT TGTCCCCCAG ACGTTTAACA AACAGCGCGA GTTCTTCAGA
GCCTTCCTAA GGCTGGCCAG GGAGCTCGAC CTCGTGGTCA ACGTCCACGC GCCGGATGCT
TGGGCCGACG TGGTGGAGGA GCTTAGGAGA GCCGACGTCG ATAGGGCGTT GATACACTGG
TACACAGGCC CCCTCGACCT ACTGGAGACG ATTAAAGACC TGGGCTACTA CATCTCCATA
AACCCAGCCG TGGTGATCCA GAAGAAGCAC CAGGAGGCGG CAAAGGCGGC CGACAGACGG
ATTGTGTTGC TCGAAAGCGA CGGGCCGTAT GAGTACCGGG GGATGAGGCT GGCGCCCCCG
CTGATAAACA AGACCGTGGA GAAGCTGGCA GAGCTCTGGG AGTTGCCTAG GGATCAAGTG
GTGGAGACCG TGGAGTCAAA TGCCAAAAGG CTATGGCGTC TGTAG
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| Protein sequence | MFDNHVHCHE FPREELEKYT KEWTLVCVSD DLATSRRTVE LEGAVRCVGI HPWQVDKAEP
GDLEAVVRLA EKAEVPCVGE VGLDRRFVPQ TFNKQREFFR AFLRLARELD LVVNVHAPDA
WADVVEELRR ADVDRALIHW YTGPLDLLET IKDLGYYISI NPAVVIQKKH QEAAKAADRR
IVLLESDGPY EYRGMRLAPP LINKTVEKLA ELWELPRDQV VETVESNAKR LWRL
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