Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1797 |
Symbol | rpl4lp |
ID | 4616684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1632725 |
End bp | 1633570 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639784881 |
Product | 50S ribosomal protein L4P |
Protein accession | YP_931289 |
Protein GI | 119873282 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.300981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.693832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGATC TGCTGTTGAA GTTTAAACAG CTGGATCTAA GCCCCTATAT ACAGCCGGGC GAGAGACCGC CTGAGAAGCT AAAGGTATAT GGGCGTGACG GGGCGTATGT TGCTGATATA GATCCGCCGG TTCACTTCAT GGAGCCGGTG AGGCCCGACA TAATCAGGAG GGCCTATCTT AGCGCTCTCT CGGCGAGATT TCAGCCTAAG GGCGTCTACG AGGGCGCTGG CAAGGAGCAC AGCTGTGAGT CCTTCGGCGT AGGTCTCGGC ATCGCTAGAA TCCCGAGGTA CAAGGGCTCG TTGTGGCCGC GCGGCTGTTT TGCCCCCAAC ACCCGCGGCG GGAGGAGGGC ACACCCGCCG AGGGTAGAGA AGAAGCTCCA TGAGGAGATA AACAAGAAAG AGAAGAATTT TGCTATTCGG TCTGCTATTG CTGCAACGGC GTATAAATCG TGGGTTATGG CTAGAGGTCA CATAATTGAC AAAGTCCCCT CTCTGCCTCT TGTAGTTGTA AGCGACGTTG AAAACATAAG TAAGGCGAAG GAGGCAAAAA AGCTGTTTGA AGTCCTTGGC CTGTGGCCCG ATGTAGAGAG GGCCGCAGAA GGTGTTAAAA TTAGGGCTGG CAAGGGGAAG ATGAGAGGTA GGCGCTATAA GGAGCCCAAA AGCGTATTAG TCGTAGTCTC TAGCTCTAAA GCCCCCTTGG CTTTTGCTGT TAGAAACTTT CCAGGTGTGG ACGTGGTATC TGTAGACAAT TTAAATATGC TTGTCTTAGC TCCTGGCGGC GTCCCTGGCA GACTAACTCT CTGGACTACG ACAGCGATAG AGAAGCTCCG CGGGCTGTTT CTATGA
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Protein sequence | MMDLLLKFKQ LDLSPYIQPG ERPPEKLKVY GRDGAYVADI DPPVHFMEPV RPDIIRRAYL SALSARFQPK GVYEGAGKEH SCESFGVGLG IARIPRYKGS LWPRGCFAPN TRGGRRAHPP RVEKKLHEEI NKKEKNFAIR SAIAATAYKS WVMARGHIID KVPSLPLVVV SDVENISKAK EAKKLFEVLG LWPDVERAAE GVKIRAGKGK MRGRRYKEPK SVLVVVSSSK APLAFAVRNF PGVDVVSVDN LNMLVLAPGG VPGRLTLWTT TAIEKLRGLF L
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