Gene Pisl_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1744 
Symbol 
ID4616837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1578246 
End bp1579010 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content54% 
IMG OID639784828 
ProductFeS assembly ATPase SufC 
Protein accessionYP_931238 
Protein GI119873231 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC TTGAGATTAG AAATCTCAGA GTTGCCGCAG GAGGGAAAGA AATTCTAAAA 
GGCGTAAGTC TAACAGTATC CAGCGGCGAA GTTGTCGTAC TTATGGGCCC TAACGGCAGC
GGTAAATCTA CGCTGTTCCA GACAATAGCT GGCAACCCTA AGTACGAAGT TCTTGATGGC
GACATATTGC TTGATGGCGA GTCTATAAAA GATCTGCCTC CGGAGGACCG CTTTGCAAGG
GGGGTATTCG TGGGTTTCCA GTCGCCGGTC GCAGTCCCAG AGGTTAGGTT CGCCTTCATG
CTCCAAGCAA TGTTGAACAT AAGGGCTGGC AAGAAGCTGA CCGACCCTAA CCCCCAGGCG
CTGGCGCAGG CCCAGAAGAT AGCGGCTGAG CTAGGCCTTA AGCCAGACGT CTTCAGCCGG
GGCGTTGGAG TTGGCTTCAG CGGAGGCGAG TTCAAGAGGG CCGAGGTTCT CCAAGCGCTA
CTCCTCCGGC CGAAGATCGT CGTTCTAGAT GAGCCAGACA GCGGCCTCGA CATCGATGGC
ATCGCCGCCG TCGGCAAAGC CATAATGGAG CTAAGCGCCT CAGGCAGTGG GGTGCTCCTC
TCGACACACT ACGCAAGAGT CCTCAGGTTC ATCAAGCCCA CCAGGGTATA CGTCATGGCG
GAGGGTAGAG TAATACTAGA GGGGGACGAG GGGGTGATAA AGAGGATAGA GGAAGTGGGC
TACCAGAATT ACTTCAGAGA AATACAGAAA GAACTCGCAC TGTAG
 
Protein sequence
MAKLEIRNLR VAAGGKEILK GVSLTVSSGE VVVLMGPNGS GKSTLFQTIA GNPKYEVLDG 
DILLDGESIK DLPPEDRFAR GVFVGFQSPV AVPEVRFAFM LQAMLNIRAG KKLTDPNPQA
LAQAQKIAAE LGLKPDVFSR GVGVGFSGGE FKRAEVLQAL LLRPKIVVLD EPDSGLDIDG
IAAVGKAIME LSASGSGVLL STHYARVLRF IKPTRVYVMA EGRVILEGDE GVIKRIEEVG
YQNYFREIQK ELAL