Gene Pisl_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1733 
Symbol 
ID4616682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1570344 
End bp1571174 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content51% 
IMG OID639784816 
ProductUbiA prenyltransferase 
Protein accessionYP_931227 
Protein GI119873220 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACTTT GGCGTTTAAT AAGAGGCGAA CATGGAGTGT TGGCGGCGCT GGCCTCAGCA 
TCCTCTTACG TAGTGGCAGG AGACGCCGAT ATAAACAAAC TCATGCTCCT CGCCATATCA
ACCTTCCTTG CAGAAGCTGG CCTCTTTGCT CACAATGATC TATCTAACAT AGAGGAAGAT
AGAGTAAATA GGCCAAACGC GCCGTTAGTT ACAGGGGCTG TAAGCATAAA CACAGCACGG
GTCGTAGCCT ACGGCACTTT GGCGACGGGC GTCGTTCTTG CCGCCTTTTT AGGTCTCACG
CCGCTGGCCG TATATGCCGT AGCCGTGGCC CTCGGCTTGT TATACAACGC CAAGTTAAAA
CGCGTGCCCG TGGTTGGTAA CTTAATAGTG GCCTTTCTTA CGTCAATGAC ATATATATAC
GGCATGACAA CAGCGGGGAA TATGTCGACT GTTTTACTTC TACTCTTTAC TTCATCTCTC
GTGGCAAACC TCGGACGGGA GTTTGTAAAA ACGGCGATAG ATTATGAGGG CGATATGAAA
TCTGGCATAA AGACGCTTGC AGTCATAACC GGCCCCTACA CAACGGCTAA ACTAGGCGCC
GCCATTACTC TGGCCTCCAC AGCCTTTGGT TGGGCTCTGG CCTATGTAGC GGCCTTTGAA
AAATTCTATG TCCTAGCGGC CGGCGCTGCG GCAACAAGCC TCACGCTGGT CTATCTGTCA
CTAGAGGCGG CGAGAGGCCG GTGGAAAAAA TATAGAGACG GCACGCTAGC CGCCTTCGGA
ATTACGCTAC TGGCTTTAGT CATAGAGGCC CTATGGCGAC TATACTCATA G
 
Protein sequence
MSLWRLIRGE HGVLAALASA SSYVVAGDAD INKLMLLAIS TFLAEAGLFA HNDLSNIEED 
RVNRPNAPLV TGAVSINTAR VVAYGTLATG VVLAAFLGLT PLAVYAVAVA LGLLYNAKLK
RVPVVGNLIV AFLTSMTYIY GMTTAGNMST VLLLLFTSSL VANLGREFVK TAIDYEGDMK
SGIKTLAVIT GPYTTAKLGA AITLASTAFG WALAYVAAFE KFYVLAAGAA ATSLTLVYLS
LEAARGRWKK YRDGTLAAFG ITLLALVIEA LWRLYS