Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1622 |
Symbol | |
ID | 4618262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1471247 |
End bp | 1472293 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639784706 |
Product | saccharopine dehydrogenase |
Protein accession | YP_931118 |
Protein GI | 119873111 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.871276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAGTGT TAGTTCTAGG TTGTGGAAAT ATAGGTAGAT ACGTATATGA CTATCTCTCG ACAAAACACG ATGTTGTAGT AGTTGATAAA GCAAAGGCGT GTCCAAATGC GTTACAACAA GATGCGTTAG AGACGCCTCT GGGCGGCTAC GATTTAGTGA TAAACGCGTT GCCAGGCAGT ATCGCATATA AGGCGTCAAA GAGAGCGCTA GAAGCTGGGC TTGATACAAT AGATATTTCC TACTACGCAG AGGACCCCCT CTCTTTACAT CAAATCGCAG TTAAAAGTGG CGCGAGATAT ATACCAGACG CCGGAATTGC CCCCGGCCTT AGCAACATAT TGGCTGGGAG ACTCGCGGCC GAGTTAGATA GAGTAGACGA ACTAGGTATT TACGTAGGTG GCATACCTGA AAAGCCCGTG GGTCCACTCG GCTACTCGGT TACATGGAAC CCGCTCGATC TGGTAGAGGA GTACACACGA CCAGCCAGAG TTTTAAAAAA CGGCGAGGTG ACATCCGTCG ACCCACTTAA CGAAGTTGAG TATATACATT CACCAATAGG CGAATTAGAA GCTTTTTATA CCGACGGACT TCGTACACTC CTAAAAACCC TAGCAGACAG AGTATCAACA ATGTATGAAA AAACGCTTAG GTGGCCAGGC CACGTTGAAA AAATACGCCT ACTCCGCGAC CTAGGCCTCA TGGATGAAAG CGGAGAGCCA CCTCCGCGGT TAGTAACTGC GACAGTTCTT TCCAAGCTTA AATTCGACGT CCCAGACGTA GTATATATGC GTGTATTTGG AACTAGAGGC GACAAGAAGA TACAGTACGA GGTCTTGGTA AAGTCTCGCG ACAGGTGGAC AGCTATGCAG ATAGCCACTG GGAGCGTTGC AATAGCTATG CAATACGTAA TAAAAGAGCT AGAACCTGGT GTTACGCCGC CGGAGTATAT AGGCATGTCT AACAAGCTAT TTCCAAGGAT TATATCTACT GTGAAACAAC ATGGAGTCTA TATATCACGA GAAGTTGTAG AGAGGGTGGT TTTATGA
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Protein sequence | MRVLVLGCGN IGRYVYDYLS TKHDVVVVDK AKACPNALQQ DALETPLGGY DLVINALPGS IAYKASKRAL EAGLDTIDIS YYAEDPLSLH QIAVKSGARY IPDAGIAPGL SNILAGRLAA ELDRVDELGI YVGGIPEKPV GPLGYSVTWN PLDLVEEYTR PARVLKNGEV TSVDPLNEVE YIHSPIGELE AFYTDGLRTL LKTLADRVST MYEKTLRWPG HVEKIRLLRD LGLMDESGEP PPRLVTATVL SKLKFDVPDV VYMRVFGTRG DKKIQYEVLV KSRDRWTAMQ IATGSVAIAM QYVIKELEPG VTPPEYIGMS NKLFPRIIST VKQHGVYISR EVVERVVL
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