Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1517 |
Symbol | |
ID | 4617962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1383195 |
End bp | 1384865 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639784599 |
Product | hypothetical protein |
Protein accession | YP_931015 |
Protein GI | 119873008 |
COG category | [S] Function unknown |
COG ID | [COG4938] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.019243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.812738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGTGT TGATGAGGGA TTTGGGCCCG GTGAGGGAGG GGGAGGTGGA GCTTGGGGAT GTCACGTTGT TTATGGGCCC GCCCAACACG GGGAAGAGCT ACGCTCTGCG GGCTATCTAT GCGAAGTTGT CGCCTCTTGA CAGATACGCC GCTGGGCGTG TGGAGGGGAG GCTGTCGACT AGGATTGCGG AGTATCTAAA GCGGGGGTTC CGGGCGGAGA TGTCGGCAAG CGTCCGCAGG TTGGTTTCTG GGGTGGTTGA GCTGGTTGCG ACTTTGAGGT CGGGTGGACG TGAAGAAGCT CGTACCGTTT TGGGGCGGAT GGGCGAGGTG GGTCTTCAAG TGGCTGAGGC CGGGGGCTCT GTTGTCGTTA GAGGTCCGCC GATGGAGTGG GCGGTGGACG TGGGTGTCTT GAGGAAGATG GCTGCGGACG CGTTTTACGG CTTTATGGCC GAGCTTGTGC CTGTGAGGGG GGTGGACGCG GTGCGGCTTG AGCCGCTCGA GCCGCTTGAT GTTGTGGGTG CGCTGAGGCG CAGTGTTGAG GCGGAGCGCC GGTATCCGTT GAGGTGGTTT GGGCAGGCAG GTGAAGTACT TAGGAGGTTG GGTTGTGGGG GTGATGAGTT GGAGCGTCTG CTGTTCTCGT CCTCGGTGAG TCTTCACTTT GATGTTTGGG TGGGTGGGAG GTCGAGTGTA TGGCTTGAGT TCCGCATAGA TACGCGGGCT TTCTCGCCGG GGGGCGCTGG CCACGTGGAG AAAACCGATG GGGGTTTGTC CAAGGCGTTG GACAAGTATG TGGAGGAGTT GGTGTCTGAG GTTGTGCACT GGTCGGCTAC CTATCTTTCT AGTGCTGTGG TGGAGGGCGT CCGCGACGCT TTGAGAAGCC GCCTTGGTTT TGAGGGGCTG CGTTTTGTTC CTTTTGGCAG AAGTGTGCTC GTCTTGGCGC TGGAGAGCGC TTCTAGGGAG CCGTATGCCA GGCCTGTGTA CCTGCGTAGG TTTGTTGGGG GGTTCTATCC AAGCGTGTTG GCGAGCTATG TCTACTGGGC GAGCGAGGGG CGGAGACGTC TGTTGGAGGG GCTCGACGAG GCGGGGGCGA GGGTTCTCGA CGCCGCCACG CCTTTGCTAG AGGGCAGGTT GGTGCCGGGC GCCGCCGGGA ACGTGCTATA TAGGGACTGG CGGGGGTCGC TTGTCGAGTT TCGACTCTCT TCTGCTCTTG TAGGCGAGGT CTCCGGCCTT CTCTTCCCCC TGCTGAGCGC GGGCGGTAGA TCTCTGGTGC TTGTCGAGGA GCCCGAGGCC CAGTTGCACC CCGGGGCGCA GATAGCGATG GCGCTCTTCT TGGCCTCGCT GCCGGCTCTA TGCGGGTGTA GGGTCGTGGC TACCACACAC AGCGACTTGC TGGCCATCAC CATGAGCCAG CTGGCGGTGC AGAGGCCGGA CAGGCAGTGG GTTGTGGAGT TGCTGGCGAG GGTTCTGCCC CATGTGAAGG AGGGCGTTGA CGTGTTGGCT GGGGCCGTGG CAGAGGCCGC CGTAGACTTG AGGATTTACG AATTCACCAG AGAGGGCAAG GTGGCGCCTG TGAGGCCGGA GGACGTGCTC GGCAAGGAGG TGCCTGGGAT AAGCAGGGTA ATCGACGAGC TCACCGATTG GGCCTTCCGC CTTGCGAGCC GCCGGGAGTG A
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Protein sequence | MRVLMRDLGP VREGEVELGD VTLFMGPPNT GKSYALRAIY AKLSPLDRYA AGRVEGRLST RIAEYLKRGF RAEMSASVRR LVSGVVELVA TLRSGGREEA RTVLGRMGEV GLQVAEAGGS VVVRGPPMEW AVDVGVLRKM AADAFYGFMA ELVPVRGVDA VRLEPLEPLD VVGALRRSVE AERRYPLRWF GQAGEVLRRL GCGGDELERL LFSSSVSLHF DVWVGGRSSV WLEFRIDTRA FSPGGAGHVE KTDGGLSKAL DKYVEELVSE VVHWSATYLS SAVVEGVRDA LRSRLGFEGL RFVPFGRSVL VLALESASRE PYARPVYLRR FVGGFYPSVL ASYVYWASEG RRRLLEGLDE AGARVLDAAT PLLEGRLVPG AAGNVLYRDW RGSLVEFRLS SALVGEVSGL LFPLLSAGGR SLVLVEEPEA QLHPGAQIAM ALFLASLPAL CGCRVVATTH SDLLAITMSQ LAVQRPDRQW VVELLARVLP HVKEGVDVLA GAVAEAAVDL RIYEFTREGK VAPVRPEDVL GKEVPGISRV IDELTDWAFR LASRRE
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