Gene Pisl_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1517 
Symbol 
ID4617962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1383195 
End bp1384865 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content62% 
IMG OID639784599 
Producthypothetical protein 
Protein accessionYP_931015 
Protein GI119873008 
COG category[S] Function unknown 
COG ID[COG4938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.019243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.812738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTGT TGATGAGGGA TTTGGGCCCG GTGAGGGAGG GGGAGGTGGA GCTTGGGGAT 
GTCACGTTGT TTATGGGCCC GCCCAACACG GGGAAGAGCT ACGCTCTGCG GGCTATCTAT
GCGAAGTTGT CGCCTCTTGA CAGATACGCC GCTGGGCGTG TGGAGGGGAG GCTGTCGACT
AGGATTGCGG AGTATCTAAA GCGGGGGTTC CGGGCGGAGA TGTCGGCAAG CGTCCGCAGG
TTGGTTTCTG GGGTGGTTGA GCTGGTTGCG ACTTTGAGGT CGGGTGGACG TGAAGAAGCT
CGTACCGTTT TGGGGCGGAT GGGCGAGGTG GGTCTTCAAG TGGCTGAGGC CGGGGGCTCT
GTTGTCGTTA GAGGTCCGCC GATGGAGTGG GCGGTGGACG TGGGTGTCTT GAGGAAGATG
GCTGCGGACG CGTTTTACGG CTTTATGGCC GAGCTTGTGC CTGTGAGGGG GGTGGACGCG
GTGCGGCTTG AGCCGCTCGA GCCGCTTGAT GTTGTGGGTG CGCTGAGGCG CAGTGTTGAG
GCGGAGCGCC GGTATCCGTT GAGGTGGTTT GGGCAGGCAG GTGAAGTACT TAGGAGGTTG
GGTTGTGGGG GTGATGAGTT GGAGCGTCTG CTGTTCTCGT CCTCGGTGAG TCTTCACTTT
GATGTTTGGG TGGGTGGGAG GTCGAGTGTA TGGCTTGAGT TCCGCATAGA TACGCGGGCT
TTCTCGCCGG GGGGCGCTGG CCACGTGGAG AAAACCGATG GGGGTTTGTC CAAGGCGTTG
GACAAGTATG TGGAGGAGTT GGTGTCTGAG GTTGTGCACT GGTCGGCTAC CTATCTTTCT
AGTGCTGTGG TGGAGGGCGT CCGCGACGCT TTGAGAAGCC GCCTTGGTTT TGAGGGGCTG
CGTTTTGTTC CTTTTGGCAG AAGTGTGCTC GTCTTGGCGC TGGAGAGCGC TTCTAGGGAG
CCGTATGCCA GGCCTGTGTA CCTGCGTAGG TTTGTTGGGG GGTTCTATCC AAGCGTGTTG
GCGAGCTATG TCTACTGGGC GAGCGAGGGG CGGAGACGTC TGTTGGAGGG GCTCGACGAG
GCGGGGGCGA GGGTTCTCGA CGCCGCCACG CCTTTGCTAG AGGGCAGGTT GGTGCCGGGC
GCCGCCGGGA ACGTGCTATA TAGGGACTGG CGGGGGTCGC TTGTCGAGTT TCGACTCTCT
TCTGCTCTTG TAGGCGAGGT CTCCGGCCTT CTCTTCCCCC TGCTGAGCGC GGGCGGTAGA
TCTCTGGTGC TTGTCGAGGA GCCCGAGGCC CAGTTGCACC CCGGGGCGCA GATAGCGATG
GCGCTCTTCT TGGCCTCGCT GCCGGCTCTA TGCGGGTGTA GGGTCGTGGC TACCACACAC
AGCGACTTGC TGGCCATCAC CATGAGCCAG CTGGCGGTGC AGAGGCCGGA CAGGCAGTGG
GTTGTGGAGT TGCTGGCGAG GGTTCTGCCC CATGTGAAGG AGGGCGTTGA CGTGTTGGCT
GGGGCCGTGG CAGAGGCCGC CGTAGACTTG AGGATTTACG AATTCACCAG AGAGGGCAAG
GTGGCGCCTG TGAGGCCGGA GGACGTGCTC GGCAAGGAGG TGCCTGGGAT AAGCAGGGTA
ATCGACGAGC TCACCGATTG GGCCTTCCGC CTTGCGAGCC GCCGGGAGTG A
 
Protein sequence
MRVLMRDLGP VREGEVELGD VTLFMGPPNT GKSYALRAIY AKLSPLDRYA AGRVEGRLST 
RIAEYLKRGF RAEMSASVRR LVSGVVELVA TLRSGGREEA RTVLGRMGEV GLQVAEAGGS
VVVRGPPMEW AVDVGVLRKM AADAFYGFMA ELVPVRGVDA VRLEPLEPLD VVGALRRSVE
AERRYPLRWF GQAGEVLRRL GCGGDELERL LFSSSVSLHF DVWVGGRSSV WLEFRIDTRA
FSPGGAGHVE KTDGGLSKAL DKYVEELVSE VVHWSATYLS SAVVEGVRDA LRSRLGFEGL
RFVPFGRSVL VLALESASRE PYARPVYLRR FVGGFYPSVL ASYVYWASEG RRRLLEGLDE
AGARVLDAAT PLLEGRLVPG AAGNVLYRDW RGSLVEFRLS SALVGEVSGL LFPLLSAGGR
SLVLVEEPEA QLHPGAQIAM ALFLASLPAL CGCRVVATTH SDLLAITMSQ LAVQRPDRQW
VVELLARVLP HVKEGVDVLA GAVAEAAVDL RIYEFTREGK VAPVRPEDVL GKEVPGISRV
IDELTDWAFR LASRRE