| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1438 |
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| Symbol | |
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| ID | 4617140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1307293 |
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| End bp | 1309023 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639784522 |
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| Product | 3-hydroxybutyryl-CoA epimerase |
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| Protein accession | YP_930938 |
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| Protein GI | 119872931 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase
[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.410853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0151032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCG TAGCTGTAAT CGGGGCTGGC ACAATGGGCC ACGGCATCGC TGAACTTTTT
GCACTAGCAG GCTATGAAGT AAACCTAGTA GATATTTCAC AAGATATATT AAACAAAGCG
CTAAGAAATA TAGAAGACTC GCTTAAGAAG GTAAAAGAAC GAGGCCGACT AAAAGAAGAT
GTGGCAACTG TTTTATCTCG TATTAGGCCT GTTGTTGGTG ATGTGTGTAG TGCGGTTGTT
GGTGTTGAGC TTATGGTTGA GGCTGTGGTA GAGGATATTG AAGTTAAGAA GAGAGTTTTT
GCCGAAGCTG ACCGTTGCGC GCCGCCAGAG GCAATACTAG CCACAAACAC ATCTTCACTA
CCAATAACAG AAATCGCAGA AGCAGTAAAA CCAGAGAGAA GAACAAAAGT AGTAGGAATG
CACTTCTTCA ACCCACCAGT ACTAATGCCG CTGGTAGAAG TGATCAAAGG GCAATACACC
AGTGACGAAA CTGTAAAGAG AGTTGTAGAC TATGTGAAAA AATTGGGTAA AGAGCCTGTG
GTTGTAAATA GAGACGTCCC TGGTTTTATA GTAAATAGAA TACTAGCGAG AGTAAACGAG
GCGGCGTGTT GGCTTGTGGC TAGGGGGTTG TCGACGCCTG AAGTGATAGA TGCCGTGGCT
ATATATAAAG TGGGTCTGCC TATGGGAGTC TTTCTCCTAA TGGATTTCGT TGGGCTAGAC
GTCGTATGTT TTGTAGCAGA GGCTATGAAA AAACGTGGTT TCAAATCTCA TCCATGTCCA
CTTATTCTTG AGAAGTGTCA ACAGAAGAAG TATGGCGTTA AGTCGGGAGA GGGCTTTTAT
AAATATCCAG CCCCAGGCAA GTTCCAATGG CCCGAGGTGC CGAAATCAGC AGGCGATAGA
ATAGATATAG CATATATACT CGCTCCCGCC ATAAATGAGG CTGCTTATCT TCTTAGAGAG
GGTATTGCTA CGAGAGAGGA TATTGACAAG GCTGTGAGAC TTGGCTTAAA CTGGCCTAAA
GGGCCTCTAG AATATGCAGA CGAAATAGGA ATAGACACAA TAGTCAAAAC GCTAGAAGAG
TGGGTTAAAA TGGGGTTTAA AGAGCTGGCG CCGGACCCAC TGCTTGTACA GATGGTAAAA
GAGGGTAGAG TTGGGAGAAA GTCGGGAGAG GGCTTTTATA AATATGCCAA GTCTGTAATT
TCTGCTGTAA CAGAGACGTT AGAAAAGCTC TATGGAGAAC CTTTGAAACA GCTGGAGTCG
TTAATCACGG TTACAGGTCT TCCAGTGTAT AAAGACCCTA GGAGCGGCGC ATTGTTATGG
GTAGACGTAC GCGAACTTAG GCTTAGGTTT ACTCTGTCTG TAAATAGACT TGAGAAGTTT
GTAGAGGGTC TTCAAAAAGG CAAACTTATG TATACTCAAT GTAAGAGATG CGGCACTAAG
TACTTCCCAC CTCAAGTAGA TTGTCCAAAA TGTAAGACGT CTGATATGGA GTGGCGTGAG
ACTAGTACAG AAGGCGAGTT AATTACATGG ACTGTGATTA ATGTAAAGCC GGCGAGTTTC
TCACACCACA AAGACTATGT TGTGGGAATA GTAAAAATGC CAGATGGATT CAACATAACT
GCGTGGATAG ACGCCGATCC AAAGACATTA AAGCCAGGTA TGAAGATGAA ACTCGTCGTC
GATAGAAGAC CAGGGGAGAA CTACATAACC TACTGGTTTA CGTCCTCCTA A
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| Protein sequence | MPRVAVIGAG TMGHGIAELF ALAGYEVNLV DISQDILNKA LRNIEDSLKK VKERGRLKED
VATVLSRIRP VVGDVCSAVV GVELMVEAVV EDIEVKKRVF AEADRCAPPE AILATNTSSL
PITEIAEAVK PERRTKVVGM HFFNPPVLMP LVEVIKGQYT SDETVKRVVD YVKKLGKEPV
VVNRDVPGFI VNRILARVNE AACWLVARGL STPEVIDAVA IYKVGLPMGV FLLMDFVGLD
VVCFVAEAMK KRGFKSHPCP LILEKCQQKK YGVKSGEGFY KYPAPGKFQW PEVPKSAGDR
IDIAYILAPA INEAAYLLRE GIATREDIDK AVRLGLNWPK GPLEYADEIG IDTIVKTLEE
WVKMGFKELA PDPLLVQMVK EGRVGRKSGE GFYKYAKSVI SAVTETLEKL YGEPLKQLES
LITVTGLPVY KDPRSGALLW VDVRELRLRF TLSVNRLEKF VEGLQKGKLM YTQCKRCGTK
YFPPQVDCPK CKTSDMEWRE TSTEGELITW TVINVKPASF SHHKDYVVGI VKMPDGFNIT
AWIDADPKTL KPGMKMKLVV DRRPGENYIT YWFTSS
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