| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1434 |
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| Symbol | |
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| ID | 4616765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 1300952 |
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| End bp | 1302940 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639784518 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_930934 |
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| Protein GI | 119872927 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0508311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0451179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAG TTGCAGTAAT CGGGGCTGGC ACAATGGGCC ACGGCATTGC TGAACTTTTT
GCTATGGCGG GTTACGAAGT GGCGCTTGTA GATGTTGCTG ACGAATACCT AAAGCGCGCG
CTCCAAAATA TAGAGTGGTC TCTTAAGAAG CTAGCAGAGA AGGGCCAGTT GAAGGAAGAC
CCCTCGGCTG TGCTCTCTCG TATTAGGCCT GTTGTTGGTG ATGTGTGTAG TGCGGTTGTT
GGTGTTGAGC TTATGGTTGA GGCTGTGGTA GAGGATATTG AAGTTAAGAA GAGAGTTTTT
GCCGAAGCTG ACCGTTGCGC GCCGCCAGAG GCAATACTAG CCACAAACAC ATCTTCACTA
CCAATAACAG AAATCGCAGA AGCAGTAAAA CCAGAGAGAA AAACAAAAGT CGTAGGAATG
CACTTCTTCA ACCCACCAGT ACTAATGCCG CTAGTAGAAG TGATCAAAGG GCAATACACC
AGTGACGAAA CTGTAAAGAA GGTGGCAGAA TACGCGCAGA AGCTTGGTAA ACAAACTGTA
GTGGTAAATA GAGACGTCCC TGGTTTTATA GTAAATAGAA TACTAGCGAG AGTAAACGAG
GCGGCGTGTT GGATGGTTGC CCGTGGCGAG GCTACAATAC AGGAGGTGGA CTCTGCGTTG
ATATATAAGG CTGGGCTTCC CATGGGCGCC TTTATTCTTA TGGATTACAC AGGGATTGAT
GTAATCTGTT TCATAGGCGA CGCCATGTTA AAACGTGGTT TCAAATCTCA TCCATGTCCA
CTTATTCTTG AGAAGTGTCA ACAGAAGAAG TATGGCGTTA AGTCGGGAGA GGGCTTTTAT
AAATATCCAG CCCCAGGCAA GTTCCAATGG CCCGAGGTGC CGAAATCAGC AGGCGATAGA
ATAGATATAG TATATATACT CGCTCCCGCC ATAAATGAGG CTGCTTATCT TCTTAGAGAG
GGTATTGCTA CGAGAGAGGA TATTGACAAG GCTGTGAGAC TTGGCTTAAA CTGGCCTAAA
GGGCCTCTAG AATATGCAGA CGAAATAGGA ATAGACACAA TAGTCAAGAC GCTAGAAGAG
TGGAGACAGA AGACGGGATT TGAGGAGTAC GAGCCAGACC CGTTGTTGAA AGAAATGGCC
GCCAAGGGTA AGCTTGGTAA GAAGACTGGG GAGGGCTTCT ATACATATGT GAAGGCTGAA
GAGAAGAAAT TAGAGACTCT CATCGTGAGA TACGAGCCCG GCATCGCCTG GATTATTCTC
AATAGGCCTG AACGCCTCAA CGCCATAAAC CCAAAAATGA TCGAAGAGCT GTGGAAAGTT
CTTGACGAAA TTGAACAGAT GGATTACGAC AAGGTGAGAG TTGTAATTAT CACAGGCGCT
GGGAGGGCCT TCTCCGCCGG CGCAGACGTC ACAAGTTTTA TGGGCGCCAC GCCTATAACA
ATATTCAAAA TATCTCGGAA GTTACAAATG CTCTTTGAGA GAATAGAGCT TTTAGACAGG
CCGGTAATAT GTGGCTTAAA TGGGTATACC CTAGGCGGAG GTCTAGAGCT TGCTATGTCT
TGTGATTTTA GAATAGCGGC TGAAACAGCA GAGTTAGGCC AGCCAGAGAT AAACCTTGGG
TTTATCCCAG GCGCCGGGGG AACGCAGAGA TTGCCCAGGC TAATTGGGAG AGATAGAGCT
AAGGAGCTTA TATTCACCGG CGATAGAATT CCGGCGAGAG AGGCAGAGAG ACTAGGCCTT
GTAAATAAAG TGGTGCCGCC GGACAAACTA GAACAAGAAC TCAGGGCGTT TGCCAACAAG
CTTGCTGAAA AACCGCCTCT CGCCCTCGCC ATGGCGAAAT ATGCAATAAA CTTCGGCATC
GAAGTCCCAA TATGGGCCGC GACGTTGCTA GAGGCTACAC AATTTGGCAT ACTATTCAGC
ACAGAAGACG TCATAGAAGG CGTTTCTTCA TTTCTACAGA AGAAAAAGCC ACAGTTTAAA
GGCCGGTAG
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| Protein sequence | MPKVAVIGAG TMGHGIAELF AMAGYEVALV DVADEYLKRA LQNIEWSLKK LAEKGQLKED
PSAVLSRIRP VVGDVCSAVV GVELMVEAVV EDIEVKKRVF AEADRCAPPE AILATNTSSL
PITEIAEAVK PERKTKVVGM HFFNPPVLMP LVEVIKGQYT SDETVKKVAE YAQKLGKQTV
VVNRDVPGFI VNRILARVNE AACWMVARGE ATIQEVDSAL IYKAGLPMGA FILMDYTGID
VICFIGDAML KRGFKSHPCP LILEKCQQKK YGVKSGEGFY KYPAPGKFQW PEVPKSAGDR
IDIVYILAPA INEAAYLLRE GIATREDIDK AVRLGLNWPK GPLEYADEIG IDTIVKTLEE
WRQKTGFEEY EPDPLLKEMA AKGKLGKKTG EGFYTYVKAE EKKLETLIVR YEPGIAWIIL
NRPERLNAIN PKMIEELWKV LDEIEQMDYD KVRVVIITGA GRAFSAGADV TSFMGATPIT
IFKISRKLQM LFERIELLDR PVICGLNGYT LGGGLELAMS CDFRIAAETA ELGQPEINLG
FIPGAGGTQR LPRLIGRDRA KELIFTGDRI PAREAERLGL VNKVVPPDKL EQELRAFANK
LAEKPPLALA MAKYAINFGI EVPIWAATLL EATQFGILFS TEDVIEGVSS FLQKKKPQFK
GR
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