Gene Pisl_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1385 
Symbol 
ID4617329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1255408 
End bp1256514 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content56% 
IMG OID639784471 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_930888 
Protein GI119872881 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA AGCCCGCTAT CATCATTGTT GATGGTAGAG AAGACCTTTC TAAACGTCTC 
TCTCAGACGC CGCTATATTT CGCATATCGT GGGCCCCATG GGAAGTGGTT TAGAAGCGTA
GCCGAGAAAC ACTTAGACAC AGACTGGGCC TCTCTCCCAC CTGCTGAAGT TAAGACGGCG
ACGAGGAGAG AGCTAATAAC AGGGGGCTTC ATAAGGCTGA GGGACACAGT GGTGGTAGAC
CAAGCCAAGT GTATCTGGTG CGGCATGTGT GTCAGATCTT GTCCAGCTAC GGCTTTTGAA
TATGTTGAGA GGAAATCTAT TAGAGTGAGG TACGACCGGT GTATAGACTG CGGCCTATGC
AACGCCGTGT GTCCCGTCGA GGCTGTGAAG ATGCCGTCTC TACCTGACGG CTTTCTCGCC
GAGCTTATAA AGACGGCTCC AGGGCCGTTG AAATTTATCT GTGACTATGC CTTCCAAGAT
GGCGACGAGG AGGGGGTGAG GGTCAAGTGT ATCGCAGCCA TACCTAAGCA ATATCTCTAT
ATTGCGGCGG CGAAATATGG CGAAGCCAGA GCCCACTGCT CCCGCGGCGA GAGGTGTCCC
CTGTGGCCAG CCGTGGAGAA GTGGGGCGCG GGGCTTGTCC GCGAGGGCAG AGACTTCGTG
GTGAGGGCCG AGAAGGCTCC TCTACAGCCT GGAGACAGGT GGCAGACGAG GATGCTCGCC
GTGGCCCTGG GAATGTCTGT CGGCAGAGTG GAGGTGGCAG GGGGGTGCAC CCTCTGCGGG
GCCTGTGTCA ACGTCTGTCC TACAGACGCC CTCTCCATAA AGGGCTTTGA GCTCCGTCTC
ACGCCGGCGT TATGTATCGC CTGCGGTGTT TGTGTAGAGA AATGCCCAGA GAAAGTGATA
AAGATTGGGA AGACCCGGGA AGACAAGCCC TACGAGTCTA GGGTCGTCTT CCGCGACAGC
CCCGCCAGAT GCTCTTCCTG CGGAAAACCT CTGCCATACA CGGAGACTAT GGCGCGGAAG
CTGGCCGAAA GATTAAAAGA GAGGGGGCTC CCCTACGAGT ATATATACCT CTGCGAGGAG
TGCCGTCTCA AGTCTTCGCC CGTCTAG
 
Protein sequence
MSDKPAIIIV DGREDLSKRL SQTPLYFAYR GPHGKWFRSV AEKHLDTDWA SLPPAEVKTA 
TRRELITGGF IRLRDTVVVD QAKCIWCGMC VRSCPATAFE YVERKSIRVR YDRCIDCGLC
NAVCPVEAVK MPSLPDGFLA ELIKTAPGPL KFICDYAFQD GDEEGVRVKC IAAIPKQYLY
IAAAKYGEAR AHCSRGERCP LWPAVEKWGA GLVREGRDFV VRAEKAPLQP GDRWQTRMLA
VALGMSVGRV EVAGGCTLCG ACVNVCPTDA LSIKGFELRL TPALCIACGV CVEKCPEKVI
KIGKTREDKP YESRVVFRDS PARCSSCGKP LPYTETMARK LAERLKERGL PYEYIYLCEE
CRLKSSPV