Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1344 |
Symbol | |
ID | 4616501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1222320 |
End bp | 1223702 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639784433 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_930850 |
Protein GI | 119872843 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.230995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGA CAGTAGATTT AGAGAAACGC TTAGGCAAAG AAAAAGTGAT TAGAGATCCA GATATATTGC GTATATACGC CAGAGATCCC ACCTTGTTGG AGTACCAACT TCCGTTAGCC GTGGTATATG CGGAATCTGT AAACGACGTC GTTGAAGTCG TTAAGTTTGC CATTGAGAAT AAGTTATATA TCACGCCTGT CTTCCACTCA ACCTCTCTTT CCGGCAACGC CGCCACCACA GCGCAGAAAA CCATAGTGCT TTCATCAGAG AAAATGAATA GAATTCTTGA GGTGTCAGAA GTGGACTGGC TAGCTACGGT CGAACCTGGG ATAAGAATAG ACGAGTTTAA CCTAGAGCTG ATGCGCTACG GTTTACAATG GCCGGTGGAT CCTGCATCTT CTAAGACGGC CTCTGTAGGG GGCACTATAA TTAACGGTGG CGGCGGCATG AGGGGGGCTA AATATGGCCC GGCTTCTCAC TGGGTACTCG GACTAGAGGC GGTAATTGGC ACTGGCGAAA TTATCAGAGT CGGATGCCGC ACAGTCAAAT GTAGAGAGGG CTACGATATA CTCCATTTGT TCGTGGGTAG CGAGGGGACT TTGGGGATTA TAACCAAAGC AATGCTGAGA CTGGCGCCTC TGCCAGAGTC TTTCGTGGGG GTCGTAGCCC AATTTGAAGA CGTTGTCTCA CTGGCGAAGG CCGTTGTTGA AAGCAGACGG AGAAGGCTGT GGCTATTAGT GGCGGAGTTT ATGGATGACG ACAGTTCTGA ATTCGTGGGG CTTGAGCGAA AGTACACGCT TTGGCTCGGC ATAGATGCCA CAAAAGGGTC TGAAGATGTC ATGTTAACGC GTCTTAGAGA AGTTATAGAT AAAGTCGGCG GGAAAATAAG CGCCGAGGCG AGAGACTGGG GAACCTTCTT CAAACTACTG GGACCCCGCC GTCTGTTATA TCCAGCGTCC GTCAAAAAAG CCATAGAACA ATACGGCGGA GACGCTTTAG TACTTATAGG CGATGTGGCC GTGCCGTTTT CTAAGCTACC TGAAGCGTTA CAGGAGATGA AACAAACCGC CAAGGATTAC GGCATACCAA CGATATTTGG CGGACACGTA GGCGATGGCA ATATCCACCC TATACTGTGG TTTAATAAGT CAGATGAAAT TCAGAAAAAG AAAGTCGCTG AGCTCTATGA AAGGTTTGAC GAAATTGCAC TAAGACATGA AGGTACTATA AGTGCAGAAC ACGGCATAGG GCTTCATAAG AAAGAGTTCC TGAAGAAAAC GTATGAAGCA AAGAACTCGG CGGCCGTCCT CAGAATATTT AGAGAAATTA AACGCATATT TGATCCCTAC GGCATATTTA ACCCTGGCAA GATATTCGAC TAA
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Protein sequence | MSVTVDLEKR LGKEKVIRDP DILRIYARDP TLLEYQLPLA VVYAESVNDV VEVVKFAIEN KLYITPVFHS TSLSGNAATT AQKTIVLSSE KMNRILEVSE VDWLATVEPG IRIDEFNLEL MRYGLQWPVD PASSKTASVG GTIINGGGGM RGAKYGPASH WVLGLEAVIG TGEIIRVGCR TVKCREGYDI LHLFVGSEGT LGIITKAMLR LAPLPESFVG VVAQFEDVVS LAKAVVESRR RRLWLLVAEF MDDDSSEFVG LERKYTLWLG IDATKGSEDV MLTRLREVID KVGGKISAEA RDWGTFFKLL GPRRLLYPAS VKKAIEQYGG DALVLIGDVA VPFSKLPEAL QEMKQTAKDY GIPTIFGGHV GDGNIHPILW FNKSDEIQKK KVAELYERFD EIALRHEGTI SAEHGIGLHK KEFLKKTYEA KNSAAVLRIF REIKRIFDPY GIFNPGKIFD
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