Gene Pisl_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1265 
Symbol 
ID4617734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1151803 
End bp1152657 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content47% 
IMG OID639784355 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_930772 
Protein GI119872765 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.92382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTG GTGTAATCGG GCTTGGAATA ATGGGGGCGC CCATGGCTAT GCATCTCCAC 
AGAGCGGGCC TACTAGCGGC TGTGTATAAT AGAACGAAAT CTAAAGCGGA GCCTTTTGAA
AAACTTGGAG TCTACGTTGC AAGCTCTCCT GCCGATTTGG CACAAAGAGT AGATGTAGTA
ATTATTATGG TGTCAGACGC GCCAGATGTG GAACAAGCGC TTTTTGGATC CCGCGGAGTG
GTAGAGGGCG CCAAGCCGGG TCTAGTGGTA GTAGATATGT CGACGAATTC TCCTGAGTGG
GCCAGGAGAT TTGCAGAGAG ATTAGCACAA TACGGAGTGA AGTTTCTCGA CGCGCCTGTT
ACAGGCGGGC AGAAGGGCGC AATTGAGGGA ACTCTCACTA TTATGGTCGG GGGAGATGAG
GAGTTGTTTC AGAAGTTACT TCCAGTCTTT AAGGCCTTTG GAAAGACTGT AGTACATGTG
GGGCCTGTGG GATATGGGCA AGCTATGAAG TTGGTAAATC AAATCGTAAT AGCGTTAAAT
ACTATTGCAA TGGTAGAGGG GTTACGCCTA GCGAAAGCTC TTGGCCTTGA CATAGATAAG
GTTGCCCAAG TGCTTTTTAG TGGTGCTGCA AAATCTGGGT CTATAGAGCT TTATCTACCG
AAGCTATTAA AGGGCGATTT ATCTCCTGGT TTTAAGGCAG CCCATCTAAA GAAGGACTTG
GCATATGCCA TGGAGATAGC AAATAAGTTA AACATATCTC TCCCAGGCGC TGCACTTGCA
TTAGAACTCT ATAAGAAGAT GGTAGAGAGG GGATTAGGCG AACTGGGTAT ACATGCATTA
AGTGAAATAT ATTAG
 
Protein sequence
MRVGVIGLGI MGAPMAMHLH RAGLLAAVYN RTKSKAEPFE KLGVYVASSP ADLAQRVDVV 
IIMVSDAPDV EQALFGSRGV VEGAKPGLVV VDMSTNSPEW ARRFAERLAQ YGVKFLDAPV
TGGQKGAIEG TLTIMVGGDE ELFQKLLPVF KAFGKTVVHV GPVGYGQAMK LVNQIVIALN
TIAMVEGLRL AKALGLDIDK VAQVLFSGAA KSGSIELYLP KLLKGDLSPG FKAAHLKKDL
AYAMEIANKL NISLPGAALA LELYKKMVER GLGELGIHAL SEIY