Gene Pisl_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1258 
Symbol 
ID4618099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1144737 
End bp1145471 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content46% 
IMG OID639784349 
ProductABC transporter related 
Protein accessionYP_930766 
Protein GI119872759 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA TAGAGATAAT AAAAGTCAGG AAGAGCTATG GAAACGTAGT AGTGTTTAAC 
GATCTTACGA TGTCTATAGC TAAAGGCGAG TTTGCCGCCT TACTTGGCCC CTCTGGATGT
GGCAAAAGCA CATTATTAAG GATGATAGCT GGTTTGGAGA AGCCAGATGC TGGCATAATT
AAATTCAGGG ACGAATTAAT TCGAGGGCCT AGACGTGAGA TTGCGCTTAT GTTTCAATCG
CCCACGTTAT TGCCTTGGAA AACTGCGCTT GACAATGTGG CCTTGCCGCT AGTGGCCAGA
GGTATGAGCT GGAATGAGGC AAGAGAGATA GCAATGAGAT ATCTATCTTT TGTCGGCCTC
TCGGGCTTTG AGGAAGCATA TCCACGTCAG CTGTCGGGAG GTATGCAACA AAGAGTGGCG
CTTGCGAGAG CTCTCGCAGT AGAGCCAGAG GTTTTGTTAC TAGACGAGCC TTTCTCAGCG
CTTGACCCCC TCACAGCAGA GAGCCTAAGA GCCGAGATTG TCAAATTATG GCATGACAAC
CTTACCACAA TACATACAGT GGTTATGGTT ACACATTCAG TAGACGAAGC CGTATACATG
GCCAACAGAG TTGTTGTATT TAGCCCCCGC CCCGCAAAAG TAGTAGCTGA CATAAAGATA
GATCTGCCAT ACCCCAGGAA TAGGAGAAGC CCGGAATTTC AGAAATACCT AGATCAGATA
TATGCCTATA TTTAA
 
Protein sequence
MALIEIIKVR KSYGNVVVFN DLTMSIAKGE FAALLGPSGC GKSTLLRMIA GLEKPDAGII 
KFRDELIRGP RREIALMFQS PTLLPWKTAL DNVALPLVAR GMSWNEAREI AMRYLSFVGL
SGFEEAYPRQ LSGGMQQRVA LARALAVEPE VLLLDEPFSA LDPLTAESLR AEIVKLWHDN
LTTIHTVVMV THSVDEAVYM ANRVVVFSPR PAKVVADIKI DLPYPRNRRS PEFQKYLDQI
YAYI