| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1115 |
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| Symbol | |
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| ID | 4616742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1013610 |
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| End bp | 1015364 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639784209 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_930629 |
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| Protein GI | 119872622 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.41546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTTTG GAGAACTTGT CAAAACTCTA GCCGCCGTAG AGTCTACCAC CCAGAGGACC
ACTATGGTTA AGCTTTTAAC TTCTCTTTTT AAGAAGGCGC GGCCTGAGGA AATAGATAAA
ATAATCTACT TTGTCTTAGG CGATTTAAGA CCCCCGTGGG AGGGGGTGGA GCTGGGGGTT
GCGGAGAAGT TGTGTCTTAG GGCGGTTTCT AAAGCGACGG GAGTTTCTAT ATCTGAACTC
GAGGCGCTTT ATAAAAAGAC GGGCGACGTA GGAGAGGCGG CTAGAAAAGC GCTGTCAACA
GCCAAGCGCC CTGGTCTCTT GGCCTTTGGC CAACAAAAGC CGCTGGAGGT GTCTGAAGTA
TATGACACAC TTCTTAAAGT TGCGCAAGCG TCTGGAGAGG GGGCGCAGGA CATGAAGATC
TCTCTATTGG CGTCGCTTTT TGCAAAAGCC TCGCCAGAGG AGGCTAAATA TATCGCTAGA
TTTGTCGTAG GCAAACTAAG GCTGGGTGTT GCAGATATGA CGTTGATAGA GGCGTTGTCT
GACGCCTTTG GCGTAGATAA AGAGGCTCTA GAGAGGGCTT ACCACATTTA TCCAGACTTG
GGCAAACTGG CGCGCCACGT GGCAGAAGGG AGGCCGCTTG AGGAGATTAA AATTACGCCG
GGCGTGCCCG TCCTCCCAAT GTTGGCGCAG AGACTTTCCT CCTCTTCTGA GATTTTAGCT
AAACTGGGGG GCTCTGCCAT ATGTGAATAT AAATACGATG GGGAGAGGGC GCAGATCCAT
CTAAAAGAGG GCGTTGTGAA GATATTCAGT AGGAGACTTG AAGATATTAC ACACGCCTAC
CCAGACGTAG TTAAAGCTGT GAGAGAGGCT GTCTCAGCTA GAGAGGCTAT CTTAGAGGGG
GAGATTGTAG CTATAGACCC CGACACAGGC GATATGCTGC CGTTTCAAGA ACTTATGCAT
AGAAAGAGAA AACACGAGGT GGCTGTTGCA GTGGAGATGT ACCCAGTGGT TCTCAACCTC
TTTGACCTAC TGTATATAGA TGGCGAGGAT TTAACAAACG AGCCTCTTAT ATATCGTAGA
GTGAGACTGT CGGAGGTTGT ACAAGAGACG GAGAAGGTGT CGATAGCTAA GTGGAGGGTT
TTTGACGACG CAGAGGAGAT AGATGTGTTT TTCCACGAGG CCGTCTCTCT AGGCATGGAG
GGCCTCGTTT GTAAATCGCC TACGTCGGTA TATGAAATGG GGGCCAGGGG GTGGAACTGG
ATTAAATACA AGAGAGATTA CAAAAGCGAG ATGATAGACA CAGTAGATTT AGTAGTAGTA
GGCGCTTTCT ATGGCAGAGG AAAACGCGCC GGGCTCTACG GCGCTTTTCT CCTCGCGGCG
TATGACCCAG CCACAGACAT GTTTTACACA GTCTGTAAAG TGGGGAGCGG ATTTACAGAC
GCCGACCTTA AAAAAATGTA CGAGATGTTG CAGCCGTATA AAATACCACA TAGACATCCG
AGAGTTGTCT CTAAGATGGA GCCCGACGTT TGGTTTACGC CTCAGGTTGT AATTGAAGTC
ATCGGCGCGG AGATTACGCT GTCGCCTCTC CACACTTGTT GTCTAGGGGC TGTAAAGCCG
GGGGTCGGCC TGGCCATTAG ATTCCCAAGA TTTACAGGCC GCTATAGGAC AGATAAATCG
CCTGAACAAG CCACGACTGT GTCTGAGATG ATAGAGCTCT ATAAGAGACA GAAAAAGGTA
GCTCAGCCCG AGTAG
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| Protein sequence | MQFGELVKTL AAVESTTQRT TMVKLLTSLF KKARPEEIDK IIYFVLGDLR PPWEGVELGV
AEKLCLRAVS KATGVSISEL EALYKKTGDV GEAARKALST AKRPGLLAFG QQKPLEVSEV
YDTLLKVAQA SGEGAQDMKI SLLASLFAKA SPEEAKYIAR FVVGKLRLGV ADMTLIEALS
DAFGVDKEAL ERAYHIYPDL GKLARHVAEG RPLEEIKITP GVPVLPMLAQ RLSSSSEILA
KLGGSAICEY KYDGERAQIH LKEGVVKIFS RRLEDITHAY PDVVKAVREA VSAREAILEG
EIVAIDPDTG DMLPFQELMH RKRKHEVAVA VEMYPVVLNL FDLLYIDGED LTNEPLIYRR
VRLSEVVQET EKVSIAKWRV FDDAEEIDVF FHEAVSLGME GLVCKSPTSV YEMGARGWNW
IKYKRDYKSE MIDTVDLVVV GAFYGRGKRA GLYGAFLLAA YDPATDMFYT VCKVGSGFTD
ADLKKMYEML QPYKIPHRHP RVVSKMEPDV WFTPQVVIEV IGAEITLSPL HTCCLGAVKP
GVGLAIRFPR FTGRYRTDKS PEQATTVSEM IELYKRQKKV AQPE
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