Gene Pisl_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1112 
Symbol 
ID4617474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1011686 
End bp1012282 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content54% 
IMG OID639784206 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_930626 
Protein GI119872619 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.820877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG GTCAGGCGCT TGTCTCTCAC GTACGTTCTG CCATGTTGGC TAAGCTCCGC 
GGCCAGCCCC TCCCCGAGTC TCACCCCCTT CTTTCTGGCA TGAAGAGTGG GGTGTTTGTC
ACTGTGGAGG CTATTGTGAG GTCGGGTGGG TTTGAGAGGA GGGAGGTTAG GGGGTCGCTT
GGGGTGGTAG AGCCGTTTAA AGACCTGGCG TATGACACGG CGAAGATTGC GGCTAAGCTT
GTATATGCCA TCCCCCGGTT TACTGAGTTT GACCTTAGGA GGTCTGTCAT AGAGGTCACT
CTTGTGGAAG AGCTTAGGGA GTGGGACGGC GGGCTTGCCG GCTTTGAGTG GGGGAGGGAG
GGGGTGTACG CAGTGGCTGG CCAGCGGAGG GTTGTCGTAC TTCCACAGAC TATGATAGAG
AGGAAGATCC TTGGCGAGGC TCTCTTGAGG TATATTGAGT CTATGGCGGG GCCCCCCGAG
AGGTTGTATA GATTTTCTAC ACGTATTTTC TACGAGCTAC ACCCCGAGGG GGAGGTTATT
GAACGTGAGC TTTGGAAATC TCGTGTTATT AAACAATTTC TAGAAGTTGT ACGTTAA
 
Protein sequence
MSLGQALVSH VRSAMLAKLR GQPLPESHPL LSGMKSGVFV TVEAIVRSGG FERREVRGSL 
GVVEPFKDLA YDTAKIAAKL VYAIPRFTEF DLRRSVIEVT LVEELREWDG GLAGFEWGRE
GVYAVAGQRR VVVLPQTMIE RKILGEALLR YIESMAGPPE RLYRFSTRIF YELHPEGEVI
ERELWKSRVI KQFLEVVR